Evidence map›Paper›PMID 25451923›Full record

ArticleThe Journal of biological chemistry2015

Structural model of the cytosolic domain of the plant ethylene receptor 1 (ETR1).

Hubert Mayerhofer, Saravanan Panneerselvam, Heidi Kaljunen, Anne Tuukkanen, Haydyn D T Mertens, Jochen Mueller-Dieckmann

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. A Model of the Full-Length Cytokinin Receptor: New Insights and Prospects.International journal of molecular sciences · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Ethylene signaling in plants.The Journal of biological chemistry · 2020
    Review
  12. Article
  13. Review
  14. Article
  15. Modeling of Protein⁻Protein Interactions in Cytokinin Signal Transduction.International journal of molecular sciences · 2019
    Article
  16. Article
  17. Article
  18. Article
  19. Rapid cadmium SAD phasing at the standard wavelength (1 Å).Acta crystallographica. Section D, Structural biology · 2017
    Article
  20. Perception of the plant hormone ethylene: known-knowns and known-unknowns.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Hubert MayerhoferFrom the European Molecular Biology Laboratory (EMBL) Hamburg, c/o Deutsches Elektronen-Synchrotron (DESY), Building 25A, Notkestrasse 85, 22603 Hamburg, Germany.
Saravanan PanneerselvamFrom the European Molecular Biology Laboratory (EMBL) Hamburg, c/o Deutsches Elektronen-Synchrotron (DESY), Building 25A, Notkestrasse 85, 22603 Hamburg, Germany.
Heidi KaljunenFrom the European Molecular Biology Laboratory (EMBL) Hamburg, c/o Deutsches Elektronen-Synchrotron (DESY), Building 25A, Notkestrasse 85, 22603 Hamburg, Germany.
Anne TuukkanenFrom the European Molecular Biology Laboratory (EMBL) Hamburg, c/o Deutsches Elektronen-Synchrotron (DESY), Building 25A, Notkestrasse 85, 22603 Hamburg, Germany.
Haydyn D T MertensFrom the European Molecular Biology Laboratory (EMBL) Hamburg, c/o Deutsches Elektronen-Synchrotron (DESY), Building 25A, Notkestrasse 85, 22603 Hamburg, Germany.
Jochen Mueller-DieckmannFrom the European Molecular Biology Laboratory (EMBL) Hamburg, c/o Deutsches Elektronen-Synchrotron (DESY), Building 25A, Notkestrasse 85, 22603 Hamburg, Germany jochen.mueller-dieckmann@uni-hamburg.de.
European Molecular Biology Laboratory · DEDeutsches Elektronen-Synchrotron DESY · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ethylene initiates important aspects of plant growth and development through disulfide-linked receptor dimers located in the endoplasmic reticulum. The receptors feature a small transmembrane, ethylene binding domain followed by a large cytosolic domain, which serves as a scaffold for the assembly of large molecular weight complexes of different ethylene receptors and other cellular participants of the ethylene signaling pathway. Here we report the crystallographic structures of the ethylene receptor 1 (ETR1) catalytic ATP-binding and the ethylene response sensor 1 dimerization histidine phosphotransfer (DHp) domains and the solution structure of the entire cytosolic domain of ETR1, all from Arabidopsis thaliana. The isolated dimeric ethylene response sensor 1 DHp domain is asymmetric, the result of different helical bending angles close to the conserved His residue. The structures of the catalytic ATP-binding, DHp, and receiver domains of ethylene receptors and of a homologous, but dissimilar, GAF domain were refined against experimental small angle x-ray scattering data, leading to a structural model of the entire cytosolic domain of the ethylene receptor 1. The model illustrates that the cytosolic domain is shaped like a dumbbell and that the receiver domain is flexible and assumes a position different from those observed in prokaryotic histidine kinases. Furthermore the cytosolic domain of ETR1 plays a key role, interacting with all other receptors and several participants of the ethylene signaling pathway. Our model, therefore, provides the first step toward a detailed understanding of the molecular mechanics of this important signal transduction process in plants.

Indexed as

ArabidopsisCrystallography, X-RayCytosolEthylenesGene Expression Regulation, PlantPlant ProteinsProtein Structure, SecondaryReceptors, Cell Surfaceethyleneethylene receptors, plantEthylenesPlant ProteinsReceptors, Cell SurfaceArabidopsis thalianaCrystal StructureEthylene ReceptorHistidine KinasePlant HormoneSmall Angle X-ray Scattering (SAXS)Two-component System

Identifiers

PMID25451923
PMCPMC4317023
OpenAlexW2062170720

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.