Evidence map›Paper›PMID 25451302›Full record

ArticleDevelopmental and comparative immunology2015

A family of variable immunoglobulin and lectin domain containing molecules in the snail Biomphalaria glabrata.

Nolwenn M Dheilly, David Duval, Gabriel Mouahid, Rémi Emans, Jean-François Allienne, Richard Galinier, Clémence Genthon, Emeric Dubois, Louis Du Pasquier, Coen M Adema and 3 more

Abstract read
In one paragraph

Article in Developmental and comparative immunology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed.

  1. Article
  2. Unveiling the hemolymphatic miRNome composition of the schistosomiasis vector snailCurrent research in parasitology & vector-borne diseases · 2025
    Article
  3. FromFrontiers in immunology · 2025
    Review
  4. Review
  5. Article
  6. Article
  7. Accelerating snail vector genomics.Infectious diseases of poverty · 2024
    Article
  8. Review
  9. Article
  10. Review
  11. The genome and transcriptome of the snailbioRxiv : the preprint server for biology · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Experimental Infection of theMicroorganisms · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Nolwenn M DheillyCNRS, UMR 5244, Ecologie et Evolution des Interactions (2EI), Perpignan F-66860, France; Université de Perpignan Via Domitia, Perpignan F-66860, France. Electronic address: nolwenn.dheilly@stonybrook.edu.
David DuvalCNRS, UMR 5244, Ecologie et Evolution des Interactions (2EI), Perpignan F-66860, France; Université de Perpignan Via Domitia, Perpignan F-66860, France.
Gabriel MouahidCNRS, UMR 5244, Ecologie et Evolution des Interactions (2EI), Perpignan F-66860, France; Université de Perpignan Via Domitia, Perpignan F-66860, France.
Rémi EmansCNRS, UMR 5244, Ecologie et Evolution des Interactions (2EI), Perpignan F-66860, France; Université de Perpignan Via Domitia, Perpignan F-66860, France.
Jean-François AllienneCNRS, UMR 5244, Ecologie et Evolution des Interactions (2EI), Perpignan F-66860, France; Université de Perpignan Via Domitia, Perpignan F-66860, France.
Richard GalinierCNRS, UMR 5244, Ecologie et Evolution des Interactions (2EI), Perpignan F-66860, France; Université de Perpignan Via Domitia, Perpignan F-66860, France.
Clémence GenthonMGX-Montpellier GenomiX, Montpellier Genomics and Bioinformatics Facility, Montpellier F-34396, France.
Emeric DuboisMGX-Montpellier GenomiX, Montpellier Genomics and Bioinformatics Facility, Montpellier F-34396, France.
Louis Du PasquierUniversity of Basel, Institute of Zoology and Evolutionary Biology, Basel CH-4051, Switzerland.
Coen M AdemaDepartment of Biology, Center for Evolutionary and Theoretical Immunology, University of New Mexico, Albuquerque, NM 87131, USA.
Christoph GrunauCNRS, UMR 5244, Ecologie et Evolution des Interactions (2EI), Perpignan F-66860, France; Université de Perpignan Via Domitia, Perpignan F-66860, France.
Guillaume MittaCNRS, UMR 5244, Ecologie et Evolution des Interactions (2EI), Perpignan F-66860, France; Université de Perpignan Via Domitia, Perpignan F-66860, France.
Benjamin GourbalCNRS, UMR 5244, Ecologie et Evolution des Interactions (2EI), Perpignan F-66860, France; Université de Perpignan Via Domitia, Perpignan F-66860, France. Electronic address: benjamin.gourbal@univ-perp.fr.

Funding

UNM COBRE: THEORETICAL STUDY OF SPECIFICITY OF RNA SILENCING MECHANISMP20RR018754 · NCRR · UNIVERSITY OF NEW MEXICO · PI CUNNINGHAM, CHARLES · 2003 to 2011
$16.7M
Pilot Project ProgramP30GM110907 · NIGMS · UNIVERSITY OF NEW MEXICO · PI LOKER, ERIC SAMUEL · 2014 to 2018
$5.4M
COBRE Center for Evolutionary and Theoretical ImmunologyP20GM103452 · NIGMS · UNIVERSITY OF NEW MEXICO · PI LOKER, ERIC SAMUEL · 2012 to 2013
$4.2M
NCRR NIH HHS P20 RR018754NIGMS NIH HHS P20 GM103452NIGMS NIH HHS P20GM103452NIGMS NIH HHS P30 GM110907
6 · The paper itself

Abstract

Technical limitations have hindered comprehensive studies of highly variable immune response molecules that are thought to have evolved due to pathogen-mediated selection such as fibrinogen-related proteins (FREPs) from Biomphalaria glabrata. FREPs combine upstream immunoglobulin superfamily (IgSF) domains with a C-terminal fibrinogen-related domain (FreD) and participate in reactions against trematode parasites. From RNAseq data we assembled a de novo reference transcriptome of B. glabrata to investigate the diversity of FREP transcripts. This study increased over two fold the number of bonafide FREP subfamilies and revealed important sequence diversity within FREP12 subfamily. We also report the discovery of related molecules that feature one or two IgSF domains associated with different C-terminal lectin domains, named C-type lectin-related proteins (CREPs) and Galectin-related protein (GREP). Together, the highly similar FREPs, CREPs and GREP were designated VIgL (Variable Immunoglobulin and Lectin domain containing molecules).

Indexed as

Amino Acid SequenceAnimalsBase SequenceBiomphalariaGene LibraryImmunoglobulinsLectinsMolecular Sequence DataPolymorphism, Single NucleotideSequence Analysis, DNATranscriptomefibrinogen-related protein 3, Biomphalaria glabrataFREP2 protein, Biomphalaria glabrataImmunoglobulinsLectinsC-type lectinFREPsGalectinImmunoglobulin superfamilyRNAseqVIgL

Identifiers

PMID25451302
PMCPMC4255472

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.