Evidence map›Paper›PMID 25451131›Full record

ReviewBrain research2015

Leveraging biomedical informatics for assessing plasticity and repair in primate spinal cord injury.

Jessica L Nielson, Jenny Haefeli, Ernesto A Salegio, Aiwen W Liu, Cristian F Guandique, Ellen D Stück, Stephanie Hawbecker, Rod Moseanko, Sarah C Strand, Sharon Zdunowski and 12 more

Abstract readReview
In one paragraph

Review in Brain research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Jessica L NielsonBrain and Spinal Injury Center (BASIC), Department of Neurological Surgery, University of California, San Francisco, CA (UCSF), United States.
Jenny HaefeliBrain and Spinal Injury Center (BASIC), Department of Neurological Surgery, University of California, San Francisco, CA (UCSF), United States.
Ernesto A SalegioBrain and Spinal Injury Center (BASIC), Department of Neurological Surgery, University of California, San Francisco, CA (UCSF), United States.
Aiwen W LiuBrain and Spinal Injury Center (BASIC), Department of Neurological Surgery, University of California, San Francisco, CA (UCSF), United States.
Cristian F GuandiqueBrain and Spinal Injury Center (BASIC), Department of Neurological Surgery, University of California, San Francisco, CA (UCSF), United States.
Ellen D StückBrain and Spinal Injury Center (BASIC), Department of Neurological Surgery, University of California, San Francisco, CA (UCSF), United States.
Stephanie HawbeckerCalifornia National Primate Research Center (CNPRC), University of California, Davis, CA (UCD), United States.
Rod MoseankoCalifornia National Primate Research Center (CNPRC), University of California, Davis, CA (UCD), United States.
Sarah C StrandCalifornia National Primate Research Center (CNPRC), University of California, Davis, CA (UCD), United States.
Sharon ZdunowskiDepartment of Integrative Biology and Physiology, University of California, Los Angeles, CA (UCLA), United States.
John H BrockCenter for Neural Repair, Department of Neurosciences, University of California, San Diego, La Jolla, CA (UCSD), United States.
Roland R RoyDepartment of Integrative Biology and Physiology, University of California, Los Angeles, CA (UCLA), United States.
Ephron S RosenzweigCenter for Neural Repair, Department of Neurosciences, University of California, San Diego, La Jolla, CA (UCSD), United States.
Yvette S Nout-LomasDepartment of Clinical Sciences, College of Veterinary Medicine and Biomedical Sciences, Colorado State University, United States.
Gregoire CourtineCenter for Neuroprosthetics and Brain Mind Institute, Swiss Federal Institute of Technology (EPFL), United States.
Leif A HavtonReeve-Irvine Research Center (RIRC), University of California, Irvine, CA (UCI), United States; Departments of Anesthesiology & Perioperative Care, Neurology, and Anatomy & Neurobiology, University of California, Irvine, CA, United States.
Oswald StewardReeve-Irvine Research Center (RIRC), University of California, Irvine, CA (UCI), United States; Departments of Anatomy & Neurobiology, Neurobiology & Behavior, and Neurosurgery, University of California, Irvine, CA, United States.
V Reggie EdgertonDepartment of Integrative Biology and Physiology, University of California, Los Angeles, CA (UCLA), United States.
Mark H TuszynskiDepartments of Anesthesiology & Perioperative Care, Neurology, and Anatomy & Neurobiology, University of California, Irvine, CA, United States; Veterans Administration Medical Center, La Jolla, CA, United States.
Michael S BeattieBrain and Spinal Injury Center (BASIC), Department of Neurological Surgery, University of California, San Francisco, CA (UCSF), United States.
Jacqueline C BresnahanBrain and Spinal Injury Center (BASIC), Department of Neurological Surgery, University of California, San Francisco, CA (UCSF), United States.
Adam R FergusonBrain and Spinal Injury Center (BASIC), Department of Neurological Surgery, University of California, San Francisco, CA (UCSF), United States. Electronic address: adam.ferguson@ucsf.edu.

Funding

Plasticity and Regeneration in the Primate Spinal CordR01NS042291 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BRESNAHAN, JACQUELINE C, CAPITANIO, JOHN P · 2001 to 2015
$13.0M
Mechanisms of secondary injury after SCIR01NS038079 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BEATTIE, MICHAEL S, BRESNAHAN, JACQUELINE C · 1999 to 2015
$5.8M
Combinatorial Approaches to SCIR01NS049881 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TUSZYNSKI, MARK H. · 2004 to 2008
$2.7M
Towards a therapy to regenerate corticospinal axonsR01NS073857 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI STEWARD, OSWALD · 2011 to 2015
$1.7M
Bioinformatics For Translational Spinal Cord Injury ResearchR01NS067092 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERGUSON, ADAM R · 2010 to 2014
$1.6M
Metaplasticity and Recovery After Spinal Cord Injury: Cellular MechanismsR01NS069537 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERGUSON, ADAM R · 2010 to 2012
$981k
Plasticity and Regeneration in the Primate Spinal CordR56NS042291 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BEATTIE, MICHAEL S, BRESNAHAN, JACQUELINE C · 2017 to 2017
$543k
Role of AMPAR Trafficking in Spinal Cord InjuryF32NS053059 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERGUSON, ADAM R · 2007 to 2009
$154k
Translational outcome measures of cervical spinal cord injuryF32NS079030 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI NIELSON, JESSICA LEIGH · 2012 to 2014
$107k
NINDS NIH HHS F32 NS053059NINDS NIH HHS F32 NS079030NINDS NIH HHS NS049881NINDS NIH HHS NS053059NINDS NIH HHS NS067092NINDS NIH HHS NS069537NINDS NIH HHS NS079030NINDS NIH HHS NS42291NINDS NIH HHS R01 NS038079NINDS NIH HHS R01 NS042291NINDS NIH HHS R01 NS049881NINDS NIH HHS R01 NS067092NINDS NIH HHS R01 NS069537NINDS NIH HHS R01 NS073857NINDS NIH HHS R56 NS042291
6 · The paper itself

Abstract

Recent preclinical advances highlight the therapeutic potential of treatments aimed at boosting regeneration and plasticity of spinal circuitry damaged by spinal cord injury (SCI). With several promising candidates being considered for translation into clinical trials, the SCI community has called for a non-human primate model as a crucial validation step to test efficacy and validity of these therapies prior to human testing. The present paper reviews the previous and ongoing efforts of the California Spinal Cord Consortium (CSCC), a multidisciplinary team of experts from 5 University of California medical and research centers, to develop this crucial translational SCI model. We focus on the growing volumes of high resolution data collected by the CSCC, and our efforts to develop a biomedical informatics framework aimed at leveraging multidimensional data to monitor plasticity and repair targeting recovery of hand and arm function. Although the main focus of many researchers is the restoration of voluntary motor control, we also describe our ongoing efforts to add assessments of sensory function, including pain, vital signs during surgery, and recovery of bladder and bowel function. By pooling our multidimensional data resources and building a unified database infrastructure for this clinically relevant translational model of SCI, we are now in a unique position to test promising therapeutic strategies' efficacy on the entire syndrome of SCI. We review analyses highlighting the intersection between motor, sensory, autonomic and pathological contributions to the overall restoration of function. This article is part of a Special Issue entitled SI: Spinal cord injury.

Indexed as

Disease Models, AnimalMedical InformaticsNeuronal PlasticityRecovery of FunctionSpinal Cord RegenerationAnimalsHumansMacaca mulattaMotor ActivitySpinal Cord InjuriesTranslational Research, BiomedicalTreatment OutcomeAutonomic functionBig-dataBioinformaticsMotor functionNon-human primatePlasticityRecoverySensory functionSpinal cord injuryStatisticsSyndromicsTranslation

Identifiers

PMID25451131
PMCPMC4418964

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.