Evidence map›Paper›PMID 25449968›Full record

ArticleBiochimica et biophysica acta2015

Assembly of functional photosystem complexes in Rhodobacter sphaeroides incorporating carotenoids from the spirilloxanthin pathway.

Shuang C Chi, David J Mothersole, Preston Dilbeck, Dariusz M Niedzwiedzki, Hao Zhang, Pu Qian, Cvetelin Vasilev, Katie J Grayson, Philip J Jackson, Elizabeth C Martin and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 112 citations in OpenAlex.

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  19. Stem canker pathogenFrontiers in plant science · 2022
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  20. Characteristics and Application ofFrontiers in bioengineering and biotechnology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 3 countries.

Shuang C ChiDepartment of Molecular Biology and Biotechnology, University of Sheffield, Sheffield S10 2TN, United Kingdom.
David J MothersoleDepartment of Molecular Biology and Biotechnology, University of Sheffield, Sheffield S10 2TN, United Kingdom.
Preston DilbeckDepartment of Chemistry, Washington University, St. Louis, MO 63130-4889, USA.
Dariusz M NiedzwiedzkiPhotosynthetic Antenna Research Center, Washington University, St. Louis, MO 63130 USA.
Hao ZhangPhotosynthetic Antenna Research Center, Washington University, St. Louis, MO 63130 USA.
Pu QianDepartment of Molecular Biology and Biotechnology, University of Sheffield, Sheffield S10 2TN, United Kingdom.
Cvetelin VasilevDepartment of Molecular Biology and Biotechnology, University of Sheffield, Sheffield S10 2TN, United Kingdom.
Katie J GraysonDepartment of Molecular Biology and Biotechnology, University of Sheffield, Sheffield S10 2TN, United Kingdom.
Philip J JacksonDepartment of Molecular Biology and Biotechnology, University of Sheffield, Sheffield S10 2TN, United Kingdom; ChELSI Institute, Department of Chemical and Biological Engineering, University of Sheffield, Mappin Street, Sheffield S1 3JD, United Kingdom.
Elizabeth C MartinDepartment of Molecular Biology and Biotechnology, University of Sheffield, Sheffield S10 2TN, United Kingdom.
Ying LiDepartment of Microbiology and Immunology, China Agricultural University, Haidian District, Beijing 100193, China.
Dewey HoltenDepartment of Chemistry, Washington University, St. Louis, MO 63130-4889, USA.
C Neil HunterDepartment of Molecular Biology and Biotechnology, University of Sheffield, Sheffield S10 2TN, United Kingdom. Electronic address: c.n.hunter@sheffield.ac.uk.
University of Sheffield · GBWashington University in St. Louis · USChina Agricultural University · CN

Funding

TrainingP41GM103422 · NIGMS · WASHINGTON UNIVERSITY · PI YARASHESKI, KEVIN E · 2012 to 2019
$12.0M
Biotechnology and Biological Sciences Research Council BB/G021546/1European Research Council 338895NIGMS NIH HHS 8P41 GM103422-35NIGMS NIH HHS P41 GM103422
6 · The paper itself

Abstract

Carotenoids protect the photosynthetic apparatus against harmful radicals arising from the presence of both light and oxygen. They also act as accessory pigments for harvesting solar energy, and are required for stable assembly of many light-harvesting complexes. In the phototrophic bacterium Rhodobacter (Rba.) sphaeroides phytoene desaturase (CrtI) catalyses three sequential desaturations of the colourless carotenoid phytoene, extending the number of conjugated carbon-carbon double bonds, N, from three to nine and producing the yellow carotenoid neurosporene; subsequent modifications produce the yellow/red carotenoids spheroidene/spheroidenone (N=10/11). Genomic crtI replacements were used to swap the native three-step Rba. sphaeroides CrtI for the four-step Pantoea agglomerans enzyme, which re-routed carotenoid biosynthesis and culminated in the production of 2,2'-diketo-spirilloxanthin under semi-aerobic conditions. The new carotenoid pathway was elucidated using a combination of HPLC and mass spectrometry. Premature termination of this new pathway by inactivating crtC or crtD produced strains with lycopene or rhodopin as major carotenoids. All of the spirilloxanthin series carotenoids are accepted by the assembly pathways for LH2 and RC-LH1-PufX complexes. The efficiency of carotenoid-to-bacteriochlorophyll energy transfer for 2,2'-diketo-spirilloxanthin (15 conjugated C = C bonds; N=15) in LH2 complexes is low, at 35%. High energy transfer efficiencies were obtained for neurosporene (N=9; 94%), spheroidene (N=10; 96%) and spheroidenone (N=11; 95%), whereas intermediate values were measured for lycopene (N=11; 64%), rhodopin (N=11; 62%) and spirilloxanthin (N=13; 39%). The variety and stability of these novel Rba. sphaeroides antenna complexes make them useful experimental models for investigating the energy transfer dynamics of carotenoids in bacterial photosynthesis.

Indexed as

BacteriochlorophyllsCarotenoidsChromatography, High Pressure LiquidEnergy TransferMass SpectrometryOxidoreductasesPhotosynthetic Reaction Center Complex ProteinsRhodobacter sphaeroidesXanthophyllsBacteriochlorophyllsCarotenoidsOxidoreductasesPhotosynthetic Reaction Center Complex Proteinsphytoene dehydrogenasespirilloxanthinXanthophyllsAntennaBacterial photosynthesisCarotenoidLight harvestingMembrane proteinSynthetic biology

Identifiers

PMID25449968
PMCPMC4331045
OpenAlexW2066977899

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.