Evidence map›Paper›PMID 25449314›Full record

ArticleJournal of structural biology2015

The leucine-rich amelogenin protein (LRAP) is primarily monomeric and unstructured in physiological solution.

Barbara J Tarasevich, John S Philo, Nasib Karl Maluf, Susan Krueger, Garry W Buchko, Genyao Lin, Wendy J Shaw

Open access · greenAbstract read
In one paragraph

Article in Journal of structural biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Self-assembly and mineralization of full-length human amelogenin and its functional fragmentsHua xi kou qiang yi xue za zhi = Huaxi kouqiang yixue zazhi = West China journal of stomatology · 2021
    Article
  5. Review
  6. Article
  7. Amelogenin is a Potential Biomarker for the Aggressiveness in Odontogenic TumorsAsian Pacific journal of cancer prevention : APJCP · 2018
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Barbara J TarasevichPacific Northwest National Laboratory, Richland, WA 99354, United States.
John S PhiloAlliance Protein Laboratories, Inc., San Diego, CA 92121, United States.
Nasib Karl MalufAlliance Protein Laboratories, Inc., San Diego, CA 92121, United States.
Susan KruegerNational Institute of Standards and Technology, Gaithersburg, MD 20899, United States.
Garry W BuchkoPacific Northwest National Laboratory, Richland, WA 99354, United States.
Genyao LinWSP Chemicals & Technology, LLC, Leetsdale, PA 15056, United States.
Wendy J ShawPacific Northwest National Laboratory, Richland, WA 99354, United States.
Pacific Northwest National Laboratory · USAlliance Protein Laboratories (United States) · USNational Institute of Standards and Technology · US

Funding

Structural, spatial, and temporal features guiding amelogenins transformation of calcium phosphate into enamelR01DE015347 · NIDCR · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI SHAW, WENDY J · 2005 to 2025
$8.2M
NIDCR NIH HHS DE-015347NIDCR NIH HHS R01 DE015347
6 · The paper itself

Abstract

Amelogenin proteins are critical to the formation of enamel in teeth and may have roles in controlling growth and regulating microstructures of the intricately woven hydroxyapatite (HAP). Leucine-rich amelogenin protein (LRAP) is a 59-residue splice variant of amelogenin and contains the N- and C-terminal charged regions of the full-length protein thought to control crystal growth. Although the quaternary structure of full-length amelogenin in solution has been well studied and can consist of self-assemblies of monomers called nanospheres, there is limited information on the quaternary structure of LRAP. Here, sedimentation velocity analytical ultracentrifugation (SV) and small angle neutron scattering (SANS) were used to study the tertiary and quaternary structure of LRAP at various pH values, ionic strengths, and concentrations. We found that the monomer is the dominant species of phosphorylated LRAP (LRAP(+P)) over a range of solution conditions (pH 2.7-4.1, pH 4.5-8, 50 mmol/L(mM) to 200 mM NaCl, 0.065-2 mg/mL). The monomer is also the dominant species for unphosphorylated LRAP (LRAP(-P)) at pH 7.4 and for LRAP(+P) in the presence of 2.5 mM calcium at pH 7.4. LRAP aggregates in a narrow pH range near the isoelectric point of pH 4.1. SV and SANS show that the LRAP monomer has a radius of ∼2.0 nm and an asymmetric structure, and solution NMR studies indicate that the monomer is largely unstructured. This work provides new insights into the secondary, tertiary, and quaternary structure of LRAP in solution and provides evidence that the monomeric species may be an important functional form of some amelogenins.

Indexed as

AnimalsDental Enamel ProteinsHydrogen-Ion ConcentrationMiceNuclear Magnetic Resonance, BiomolecularProtein Structure, QuaternaryProtein Structure, SecondarySolutionsDental Enamel Proteinsleucine-rich amelogenin peptideSolutionsAmelogeninBiomineralizationEnamelLRAPNanosphere

Identifiers

PMID25449314
PMCPMC4400868
OpenAlexW2017192309

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.