Evidence map›Paper›PMID 25446110›Full record

ArticleBiochemical and biophysical research communications2015

ABCD2 identifies a subclass of peroxisomes in mouse adipose tissue.

Xiaoxi Liu, Jingjing Liu, Joshua D Lester, Sonja S Pijut, Gregory A Graf

Abstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. Peroxisomal ABC Transporters: An Update.International journal of molecular sciences · 2021
    Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Xiaoxi LiuDepartment of Pharmaceutical Sciences, Saha Cardiovascular Research Center, Barnstable Brown Diabetes and Obesity Center, University of Kentucky, Lexington, KY, United States. Electronic address: xiaoxi.liu@uky.edu.
Jingjing LiuDepartment of Pharmaceutical Sciences, Saha Cardiovascular Research Center, Barnstable Brown Diabetes and Obesity Center, University of Kentucky, Lexington, KY, United States. Electronic address: jingjing.liu0@gmail.com.
Joshua D LesterDepartment of Pharmaceutical Sciences, Saha Cardiovascular Research Center, Barnstable Brown Diabetes and Obesity Center, University of Kentucky, Lexington, KY, United States. Electronic address: joshua.lester@uky.edu.
Sonja S PijutDepartment of Pharmaceutical Sciences, Saha Cardiovascular Research Center, Barnstable Brown Diabetes and Obesity Center, University of Kentucky, Lexington, KY, United States. Electronic address: srhee2@uky.edu.
Gregory A GrafDepartment of Pharmaceutical Sciences, Saha Cardiovascular Research Center, Barnstable Brown Diabetes and Obesity Center, University of Kentucky, Lexington, KY, United States. Electronic address: Gregory.Graf@uky.edu.
University of Kentucky · US

Funding

University of Kentucky Markey Cancer Center Support Grant ECIA SupplementP30CA177558 · NCI · UNIVERSITY OF KENTUCKY · PI KATHLEEN L. O'CONNOR · 2013 to 2026
$38.3M
The role of IKKß in linking obesity to adipose tissue inflammation and adipogeneP20GM103527 · NIGMS · UNIVERSITY OF KENTUCKY · PI FINLIN, BRIAN S · 2012 to 2017
$13.7M
THROMBOSPONDIN1 MEDIATES MACROPHAGE INFILTRATION INTO ADIPOSE TISSUE AND PROMOTEP20RR021954 · NCRR · UNIVERSITY OF KENTUCKY · PI ECKHARDT, ERIK · 2008 to 2011
$8.3M
Center for Biomedical Research Excellence in the Molecular Basis of Human DiseaseP20GM103486 · NIGMS · UNIVERSITY OF KENTUCKY · PI LOUIS HERSH, LOUIS HERSH LOUIS HERSH · 2012 to 2013
$4.2M
The role of hepatic insulin resistance on SR-BI dependant HDL cholesterol uptakeR01DK100892 · NIDDK · UNIVERSITY OF KENTUCKY · PI GRAF, GREGORY A, VAN DER WESTHUYZEN, DENEYS REM · 2013 to 2016
$1.6M
Regulation of the ABCG5 ABCG8 Sterol TransporterR01DK080874 · NIDDK · UNIVERSITY OF KENTUCKY · PI GRAF, GREGORY A · 2009 to 2012
$1.3M
Protective Effects of Stearic Acid on Gestational and Acquired Diabetes MellitusR01DK077632 · NIDDK · UNIVERSITY OF KENTUCKY · PI GRAF, GREGORY A, SMART, ERIC J · 2006 to 2009
$1.2M
NCI NIH HHS P30 CA177558NCI NIH HHS P30CA177558NCRR NIH HHS P20 RR021954NIDDK NIH HHS DK080874NIDDK NIH HHS DK100892NIDDK NIH HHS R01 DK077632NIDDK NIH HHS R01 DK080874NIDDK NIH HHS R01 DK100892NIGMS NIH HHS P20 GM103486NIGMS NIH HHS P20GM103486NIGMS NIH HHS P20 GM103527
6 · The paper itself

Abstract

ATP-binding cassette transporter D2 (D2) is an ABC half transporter that is thought to promote the transport of very long-chain fatty acyl-CoAs into peroxisomes. Both D2 and peroxisomes increase during adipogenesis. Although peroxisomes are essential to both catabolic and anabolic lipid metabolism, their function, and that of D2, in adipose tissues remain largely unknown. Here, we investigated the D2 localization and the proteome of D2-containing organelles, in adipose tissue. Centrifugation of mouse adipose homogenates generated a fraction enriched with D2, but deficient in peroxisome markers including catalase, PEX19, and ABCD3 (D3). Electron microscopic imaging of this fraction confirmed the presence of D2 protein on an organelle with a dense matrix and a diameter of ∼ 200 nm, the typical structure and size of a microperoxisome. D2 and PEX19 antibodies recognized distinct structures in mouse adipose. Immunoisolation of the D2-containing compartment confirmed the scarcity of PEX19 and proteomic profiling revealed the presence of proteins associated with peroxisome, endoplasmic reticulum (ER), and mitochondria. D2 is localized to a distinct class of peroxisomes that lack many peroxisome proteins, and may associate physically with mitochondria and the ER.

Indexed as

Adipose TissueAnimalsATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily DEndoplasmic ReticulumMiceMice, Inbred C57BLMice, KnockoutMicroscopy, ElectronMicroscopy, FluorescenceMitochondriaPeroxisomesProteomeProteomicsSignal TransductionABCD2 protein, mouseATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily DProteomeABC transporterAdipose tissuePeroxisomeProteomicsSubcellular organelle

Identifiers

PMID25446110
PMCPMC4300297
OpenAlexW1977949786

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.