Evidence map›Paper›PMID 25445271›Full record

ArticleGene2015

PAX5 is the transcriptional activator of mucolipin-2 (MCOLN2) gene.

Jessica A Valadez, Math P Cuajungco

Open access · greenAbstract read
In one paragraph

Article in Gene, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
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  8. TRP Channels in Brain Tumors.Frontiers in cell and developmental biology · 2021
    Review
  9. A Seven-Gene Signature with Close Immune Correlation Was Identified for Survival Prediction of Lung Adenocarcinoma.Medical science monitor : international medical journal of experimental and clinical research · 2020
    Article
  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Jessica A ValadezDepartment of Biological Science, and Center for Applied Biotechnology Studies, California State University Fullerton, CA 92831, USA.
Math P CuajungcoDepartment of Biological Science, and Center for Applied Biotechnology Studies, California State University Fullerton, CA 92831, USA; Mental Health Research Institute, Melbourne Brain Centre, Parkville, Victoria 3052, Australia. Electronic address: mcuajungco@fullerton.edu.
California State University, Fullerton · USMental Health Research Institute · AU

Funding

Analysis of the Transcriptional Regulation and Expression of TRPML2R15NS070774 · NINDS · CALIFORNIA STATE UNIVERSITY FULLERTON · PI CUAJUNGCO, MATH P · 2011 to 2011
$339k
NINDS NIH HHS R15 NS070774NINDS NIH HHS R15-NS070774
6 · The paper itself

Abstract

Transient receptor potential mucolipin (TRPML) proteins belong to the TRP superfamily of non-selective cation channels. The TRPML1, -2, and -3 proteins are encoded by Mucolipin (MCOLN)-1, -2 and -3 genes, respectively. TRPML1 has been associated with mucolipidosis type IV (MLIV), while no disease phenotype has been linked with TRPML2 or -3 protein. The TRPML proteins share high sequence similarities, form hetero-tetramers, and serve in membrane trafficking, autophagy, and metal homeostasis. Previous studies suggest that TRPML2 serves a role in the immune system; however, the evidence is mostly indirect. We hypothesize that if TRPML2 is involved in immune function its expression would be likely regulated by an immune-associated transcription factor protein. Thus, we set out to identify the core promoter region and the transcription factor responsible for MCOLN2 gene expression. Using dual-luciferase assay and over-expression analyses, we reveal for the first time that B-cell lineage specific activator protein (BSAP), also known as paired box 5 (PAX5), controls MCOLN2 expression. Specifically, heterologous expression of PAX5 in HEK-293 cells significantly increased endogenous MCOLN2 transcript and TRPML2 protein levels, while RNA interference targeting endogenous PAX5 reduced its effect. Site-directed mutagenesis studies showed that the core promoter and PAX5 binding region to be between -79 and -60 base pairs upstream of the transcriptional start site. Thus, our findings add to a growing list of evidence for TRPML2's possible involvement in the immune system. The knowledge gained from this study could be used to further characterize the role of TRPML2 in B-cell development and function.

Indexed as

Gene Expression ProfilingGene Expression Regulation, NeoplasticB-LymphocytesCell Line, TumorChromosome MappingCpG IslandsEndosomesHEK293 CellsHomeostasisHumansLysosomesMutagenesis, Site-DirectedPAX5 Transcription FactorPhenotypePromoter Regions, GeneticProtein BindingMcoln2 protein, humanPAX5 protein, humanPAX5 Transcription FactorTranscription FactorsTransient Receptor Potential ChannelsB-cellBSAPEndosomesImmune systemLysosomesMucolipidosis IVTRPML2

Identifiers

PMID25445271
PMCPMC4276718
OpenAlexW2071345737

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.