Evidence map›Paper›PMID 25442347›Full record

ArticleInternational journal of radiation oncology, biology, physics2014

Automated segmentation of the parotid gland based on atlas registration and machine learning: a longitudinal MRI study in head-and-neck radiation therapy.

Xiaofeng Yang, Ning Wu, Guanghui Cheng, Zhengyang Zhou, David S Yu, Jonathan J Beitler, Walter J Curran, Tian Liu

Open access · greenAbstract readCase ReportsComparative StudyValidation Study
In one paragraph

Article in International journal of radiation oncology, biology, physics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed, 2 pooled it
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 2 syntheses or guidelines pooled it, 110 citations in OpenAlex.

  1. Pooled it
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  11. Artificial Intelligence in Radiation Therapy.IEEE transactions on radiation and plasma medical sciences · 2022
    Article
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  14. A review of deep learning based methods for medical image multi-organ segmentation.Physica medica : PM : an international journal devoted to the applications of physics to medicine and biology : official journal of the Italian Association of Biomedical Physics (AIFB) · 2021
    Review
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  18. Deep learning in medical image registration: a review.Physics in medicine and biology · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Xiaofeng YangRadiation Oncology and Winship Cancer Institute, Emory University, Atlanta, Georgia.
Ning WuRadiation Oncology, Jilin University, Chuangchun, Jilin, China.
Guanghui ChengRadiation Oncology, Jilin University, Chuangchun, Jilin, China.
Zhengyang ZhouDepartment of Radiology, Nanjing Drum Tower Hospital, The Affiliated Hospital of Nanjing University Medical School, Nanjing, China.
David S YuRadiation Oncology and Winship Cancer Institute, Emory University, Atlanta, Georgia.
Jonathan J BeitlerRadiation Oncology and Winship Cancer Institute, Emory University, Atlanta, Georgia.
Walter J CurranRadiation Oncology and Winship Cancer Institute, Emory University, Atlanta, Georgia.
Tian LiuRadiation Oncology and Winship Cancer Institute, Emory University, Atlanta, Georgia. Electronic address: tliu34@emory.edu.
Emory University · USJilin University · CNNanjing Drum Tower Hospital · CN

Funding

Winship Cancer Institute Cancer Center Support GrantP30CA138292 · NCI · EMORY UNIVERSITY · PI MADHAV V DHODAPKAR · 2009 to 2026
$47.5M
Ultrasonic Tissue-Typing-Guided Prostate BrachytherapyK01CA114313 · NCI · EMORY UNIVERSITY · PI LIU, TIAN · 2006 to 2010
$838k
NCI NIH HHS K01 CA114313NCI NIH HHS P30 CA138292
6 · The paper itself

Abstract

purposeTo develop an automated magnetic resonance imaging (MRI) parotid segmentation method to monitor radiation-induced parotid gland changes in patients after head and neck radiation therapy (RT). METHODS AND MATERIALS: The proposed method combines the atlas registration method, which captures the global variation of anatomy, with a machine learning technology, which captures the local statistical features, to automatically segment the parotid glands from the MRIs. The segmentation method consists of 3 major steps. First, an atlas (pre-RT MRI and manually contoured parotid gland mask) is built for each patient. A hybrid deformable image registration is used to map the pre-RT MRI to the post-RT MRI, and the transformation is applied to the pre-RT parotid volume. Second, the kernel support vector machine (SVM) is trained with the subject-specific atlas pair consisting of multiple features (intensity, gradient, and others) from the aligned pre-RT MRI and the transformed parotid volume. Third, the well-trained kernel SVM is used to differentiate the parotid from surrounding tissues in the post-RT MRIs by statistically matching multiple texture features. A longitudinal study of 15 patients undergoing head and neck RT was conducted: baseline MRI was acquired prior to RT, and the post-RT MRIs were acquired at 3-, 6-, and 12-month follow-up examinations. The resulting segmentations were compared with the physicians' manual contours.

resultsSuccessful parotid segmentation was achieved for all 15 patients (42 post-RT MRIs). The average percentage of volume differences between the automated segmentations and those of the physicians' manual contours were 7.98% for the left parotid and 8.12% for the right parotid. The average volume overlap was 91.1% ± 1.6% for the left parotid and 90.5% ± 2.4% for the right parotid. The parotid gland volume reduction at follow-up was 25% at 3 months, 27% at 6 months, and 16% at 12 months.

conclusionsWe have validated our automated parotid segmentation algorithm in a longitudinal study. This segmentation method may be useful in future studies to address radiation-induced xerostomia in head and neck radiation therapy.

Indexed as

AlgorithmsArtificial IntelligenceMagnetic Resonance ImagingMedical IllustrationAdultAgedFemaleFourier AnalysisHead and Neck NeoplasmsHumansLaryngeal NeoplasmsLongitudinal StudiesMaleMiddle AgedObserver VariationOrgan Size

Identifiers

PMID25442347
PMCPMC4362545
OpenAlexW2137013440

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.