Evidence map›Paper›PMID 25437606›Full record

ArticlePathogens (Basel, Switzerland)2014

Comparative Genomics Identifies a Potential Marker of Human-Virulent Anaplasma phagocytophilum.

Basima Al-Khedery, Anthony F Barbet

Abstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Exploration of geographical population structure ofCurrent research in parasitology & vector-borne diseases · 2026
    Article
  2. Article
  3. Article
  4. Epidemiological and Clinicopathological Features ofFrontiers in veterinary science · 2021
    Review
  5. Microorganisms · 2020
    Article
  6. Article
  7. Draft Genome Sequences ofGenome announcements · 2018
    Article
  8. Diversity ofFrontiers in veterinary science · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Basima Al-KhederyDepartment of Infectious Diseases and Pathology, University of Florida, Gainesville, FL 32611, USA. balkhedery@ufl.edu.
Anthony F BarbetDepartment of Infectious Diseases and Pathology, University of Florida, Gainesville, FL 32611, USA. barbet@ufl.edu.

Funding

Evolution of chronic infection in Anasplasma phagocytophilumR01GM081714 · NIGMS · UNIVERSITY OF FLORIDA · PI BARBET, ANTHONY F. · 2007 to 2010
$1.7M
NIGMS NIH HHS R01 GM081714
6 · The paper itself

Abstract

We have previously described a comparative genome analysis of nine strains of Anaplasma phagocytophilum that showed similarity between strains infecting humans and U.S. dogs and a more distant relationship with horse and ruminant strains. This suggested that it may be possible to distinguish human-infective strains using simple DNA sequence-based diagnostic tests. This would be of epidemiologic significance in identifying and tracking the presence of virulent strains in tick vector populations. Further analysis identified a gene that was present in several strains, including U.S. Ap-variant 1 (ruminant), MRK (horse), and European sheep, but was deleted in strains infecting U.S. humans and dogs, suggesting that it could be a useful marker of human virulence. A simple PCR test was developed to identify the presence/absence of this gene. The PCR test discriminated A. phagocytophilum strains from clinically affected humans and U.S. dogs from the strains more distantly related in genome sequence. This warrants further testing of globally diverse A. phagocytophilum strains to examine world-wide conservation of this gene.

Identifiers

PMID25437606
PMCPMC4235736

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.