Evidence map›Paper›PMID 25437052›Full record

ArticleEpigenetics2014

HLA-DRB1 and HLA-DQB1 methylation changes promote the occurrence and progression of Kazakh ESCC.

Jian Ming Hu, Ling Li, Yun Zhao Chen, Chunxia Liu, Xiaobin Cui, Liang Yin, Lan Yang, Hong Zou, Lijuan Pang, Jin Zhao and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Epigenetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Jian Ming Hua Department of Pathology and Key Laboratory of Xinjiang Endemic and Ethnic Diseases (Ministry of Education) ; Shihezi University School of Medicine ; Shihezi , China.
Ling Li
Yun Zhao Chen
Chunxia Liu
Xiaobin Cui
Liang Yin
Lan Yang
Hong Zou
Lijuan Pang
Jin Zhao
Yan Qi
Yuwen Cao
Jinfang Jiang
Weihua Liang
Feng Li
Shihezi University · CNTongji Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human leukocyte antigen II (HLA-II) plays an important role in host immune responses to cancer cells. Changes in gene methylation may result in aberrant expression of HLA-II, serving a key role in the pathogenesis of Kazakh esophageal squamous cell carcinoma (ESCC). We analyzed the expression level of HLA-II (HLA-DP, -DQ, and -DR) by immunohistochemistry, as well as the methylation status of HLA-DRB1 and HLA-DQB1 by MassARRAY spectrometry in Xinjiang Kazakh ESCC. Expression of HLA-II in ESCC was significantly higher than that in cancer adjacent normal (ACN) samples (P < 0.05). Decreased HLA-II expression was closely associated with later clinical stages of ESCC (P < 0.05). Hypomethylation of HLA-DRB1 and hypermethylation of HLA-DQB1 was significantly correlated with occurrence of Kazakh ESCC (P < 0.01), and mainly manifested as hypomethylation of CpG9, CpG10-11, and CpG16 in HLA-DRB1 and hypermethylation of CpG6-7 and CpG16-17 in HLA-DQB1 (P < 0.01). Moreover, hypomethylation of HLA-DQB1 CpG6-7 correlated with poor differentiation in ESCCs, whereas hypermethylation of HLA-DRB1 CpG16 and hypomethylation of HLA-DQB1 CpG16-17 were significantly associated with later stages of ESCC (P < 0.05). A significant inverse association between HLA-DRB1 CpG9 methylation and HLA-II expression was found in ESCC (P < 0.05). These findings suggest aberrant HLA-DRB1 and HLA-DQB1 methylation contributes to the aberrant expression of HLA-II. These molecular changes may influence the immune response to specific tumor epitopes, promoting the occurrence and progression of Kazakh ESCC.

Indexed as

DNA MethylationAdultAgedCarcinoma, Squamous CellCase-Control StudiesEpigenesis, GeneticEsophageal NeoplasmsEsophageal Squamous Cell CarcinomaFemaleHLA-DQ beta-ChainsHLA-DRB1 ChainsHumansKazakhstanMaleMiddle AgedNeoplasm StagingHLA-DQB1 antigenHLA-DQ beta-ChainsHLA-DRB1 ChainsACN, cancer adjacent normalCIITA, class II transactivatorCpG, CG dinucleotidesDNA methylationEC, Esophageal carcinomaESCC, esophageal squamous cell carcinomaEsophageal squamous cell carcinomaHLAHLA-II, Human leukocyte antigen IIHPV, human papillomavirusIHC, ImmunohistochemistryKazakhMassarrayMHC, major histocompatibility complexNE, normal esophageal tissues

Identifiers

PMID25437052
PMCPMC4623353
OpenAlexW2069932218

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.