ArticleFrontiers in genetics2014
Chromatin associations in Arabidopsis interphase nuclei.
Article in Frontiers in genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.
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Who cites it
17 citing papers in PubMed, 27 citations in OpenAlex.
- The generation of novel epialleles in plants: the prospective behind re-shaping the epigenome.Frontiers in plant science · 2025Review
- Plant 3D genomics: the exploration and application of chromatin organization.The New phytologist · 2021Review
- FISH Going Meso-Scale: A Microscopic Search for Chromatin Domains.Frontiers in cell and developmental biology · 2021Review
- Understanding 3D Genome Organization and Its Effect on Transcriptional Gene Regulation Under Environmental Stress in Plant: A Chromatin Perspective.Frontiers in cell and developmental biology · 2021Review
- Article
- Supernumerary B Chromosomes and Plant Genome Changes: A Snapshot of Wild Populations ofInternational journal of molecular sciences · 2020Article
- Radial Organization in the Mammalian Nucleus.Frontiers in genetics · 2020Review
- Probing the 3D architecture of the plant nucleus with microscopy approaches: challenges and solutions.Nucleus (Austin, Tex.) · 2019Review
- Nuclear Disposition of Alien Chromosome Introgressions into Wheat and Rye Using 3D-FISH.International journal of molecular sciences · 2019Article
- Transcriptome reprogramming due to the introduction of a barley telosome into bread wheat affects more barley genes than wheat.Plant biotechnology journal · 2018Article
- Repetitive DNA in the Architecture, Repatterning, and Diversification of the Genome ofFrontiers in plant science · 2018Article
- Live-cell CRISPR imaging in plants reveals dynamic telomere movements.The Plant journal : for cell and molecular biology · 2017Article
- Plant nucleolar DNA: Green light shed on the role of Nucleolin in genome organization.Nucleus (Austin, Tex.) · 2017Review
- The arrangement of Brachypodium distachyon chromosomes in interphase nuclei.Journal of experimental botany · 2016Article
- Identification of Nucleolus-Associated Chromatin Domains Reveals a Role for the Nucleolus in 3D Organization of the A. thaliana Genome.Cell reports · 2016Article
- Light signaling controls nuclear architecture reorganization during seedling establishment.Proceedings of the National Academy of Sciences of the United States of America · 2015Article
- Abundance and distribution of RNA polymerase II in Arabidopsis interphase nuclei.Journal of experimental botany · 2015Article
Corrections and comments
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Authors and funding
3 authors at 2 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The arrangement of chromatin within interphase nuclei seems to be caused by topological constraints and related to gene expression depending on tissue and developmental stage. In yeast and animals it was found that homologous and heterologous chromatin association are required to realize faithful expression and DNA repair. To test whether such associations are present in plants we analyzed Arabidopsis thaliana interphase nuclei by FISH using probes from different chromosomes. We found that chromatin fiber movement and variable associations, although in general relatively seldom, may occur between euchromatin segments along chromosomes, sometimes even over large distances. The combination of euchromatin segments bearing high or low co-expressing genes did not reveal different association frequencies probably due to adjacent genes of deviating expression patterns. Based on previous data and on FISH analyses presented here, we conclude that the global interphase chromatin organization in A. thaliana is relatively stable, due to the location of its 10 centromeres at the nuclear periphery and of the telomeres mainly at the centrally localized nucleolus. Nevertheless, chromatin movement enables a flexible spatial genome arrangement in plant nuclei.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.