Evidence map›Paper›PMID 25429968›Full record

ArticleThe Journal of biological chemistry2015

Phospholipid-binding sites of phosphatase and tensin homolog (PTEN): exploring the mechanism of phosphatidylinositol 4,5-bisphosphate activation.

Yang Wei, Boguslaw Stec, Alfred G Redfield, Eranthie Weerapana, Mary F Roberts

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Article
  3. Distinct early role of PTEN regulation during HCMV infection of monocytes.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Article
  5. Article
  6. Review
  7. Structural and Dynamic Effects of PTEN C-Terminal Tail Phosphorylation.Journal of chemical information and modeling · 2022
    Article
  8. Article
  9. The orchestrated signaling by PI3Kα and PTEN at the membrane interface.Computational and structural biotechnology journal · 2022
    Review
  10. High ResolutionFrontiers in molecular biosciences · 2022
    Review
  11. Article
  12. Article
  13. Article
  14. Structural Mechanisms of PTEN Regulation.Cold Spring Harbor perspectives in medicine · 2020
    Review
  15. Single-molecule imaging of PI(4,5)PCommunications biology · 2020
    Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Yang WeiFrom the Department of Chemistry, Boston College, Chestnut Hill, Massachusetts 02467 and.
Boguslaw StecFrom the Department of Chemistry, Boston College, Chestnut Hill, Massachusetts 02467 and.
Alfred G Redfieldthe Department of Biochemistry, Brandeis University, Waltham, Massachusetts 02454.
Eranthie WeerapanaFrom the Department of Chemistry, Boston College, Chestnut Hill, Massachusetts 02467 and.
Mary F RobertsFrom the Department of Chemistry, Boston College, Chestnut Hill, Massachusetts 02467 and mary.roberts@bc.edu.
Boston College · USBrandeis University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The lipid phosphatase activity of the tumor suppressor phosphatase and tensin homolog (PTEN) is enhanced by the presence of its biological product, phosphatidylinositol 4,5-bisphosphate (PI(4,5)P2). This enhancement is suggested to occur via the product binding to the N-terminal region of the protein. PTEN effects on short-chain phosphoinositide (31)P linewidths and on the full field dependence of the spin-lattice relaxation rate (measured by high resolution field cycling (31)P NMR using spin-labeled protein) are combined with enzyme kinetics with the same short-chain phospholipids to characterize where PI(4,5)P2 binds on the protein. The results are used to model a discrete site for a PI(4,5)P2 molecule close to, but distinct from, the active site of PTEN. This PI(4,5)P2 site uses Arg-47 and Lys-13 as phosphate ligands, explaining why PTEN R47G and K13E can no longer be activated by that phosphoinositide. Placing a PI(4,5)P2 near the substrate site allows for proper orientation of the enzyme on interfaces and should facilitate processive catalysis.

Indexed as

Allosteric SiteCatalytic DomainHumansHydrolysisMagnetic Resonance SpectroscopyMass SpectrometryMicellesMutationPhosphatidylinositol 4,5-DiphosphatePhosphatidylinositolsPhospholipidsProtein BindingProtein ConformationPTEN PhosphohydrolaseRecombinant ProteinsMicellesPhosphatidylinositol 4,5-DiphosphatePhosphatidylinositolsPhospholipidsPTEN PhosphohydrolasePTEN protein, humanRecombinant Proteins31P Field CyclingEnzyme KineticsMicellesNuclear Magnetic Resonance (NMR)Phosphatase and Tensin Homolog (PTEN)Phosphatidylinositol PhosphatasePhosphoinositidePhospholipid-binding SiteSpin-labeled Protein

Identifiers

PMID25429968
PMCPMC4340405
OpenAlexW2010698590

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.