Evidence map›Paper›PMID 25429368›Full record

ArticleBio-protocol

Extraction and Quantification of Cyclic Di-GMP from

Ankita Basu Roy, Olga E Petrova, Karin Sauer

Open access · greenAbstract read
In one paragraph

Article in Bio-protocol. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 43 citations in OpenAlex.

  1. Virulence · 2026
    Article
  2. Article
  3. Article
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  5. Article
  6. Tetracycline inducesApplied and environmental microbiology · 2025
    Article
  7. Biofilm · 2024
    Article
  8. Article
  9. Article
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  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Ankita Basu RoyDepartment of Biological Sciences, Binghamton University, Binghamton, NY 13902.
Olga E PetrovaDepartment of Biological Sciences, Binghamton University, Binghamton, NY 13902.
Karin SauerDepartment of Biological Sciences, Binghamton University, Binghamton, NY 13902.
Binghamton University · US

Funding

Role of BdlA in biofilm dispersion and virulence properties of P. aeruginosaR01AI075257 · NIAID · STATE UNIVERSITY OF NY,BINGHAMTON · PI SAUER, KARIN · 2009 to 2012
$1.1M
NIAID NIH HHS R01 AI075257
6 · The paper itself

Abstract

Cyclic di-GMP (c-di-GMP) has emerged as an important intracellular signaling molecule, controlling the transitions between planktonic (free-living) and sessile lifestyles, biofilm formation, and virulence in a wide variety of microorganisms. The following protocol describes the extraction and quantification of c-di-GMP from

Identifiers

PMID25429368
PMCPMC4241849
OpenAlexW1623417695

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.