Evidence map›Paper›PMID 25429296›Full record

ArticleFrontiers in plant science2014

Epigenetic control of effectors in plant pathogens.

Mark Gijzen, Chelsea Ishmael, Sirjana D Shrestha

Abstract read
In one paragraph

Article in Frontiers in plant science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Mutations in PpAGO3 Lead to Enhanced Virulence ofFrontiers in microbiology · 2022
    Article
  7. Article
  8. Article
  9. Accessory Chromosomes inPhytopathology · 2020
    Review
  10. Epigenetic Regulation ofInternational journal of molecular sciences · 2020
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Mark GijzenAgriculture and Agri-Food Canada London, ON, Canada ; Department of Biology, University of Western Ontario London, ON, Canada.
Chelsea IshmaelAgriculture and Agri-Food Canada London, ON, Canada ; Department of Biology, University of Western Ontario London, ON, Canada.
Sirjana D ShresthaAgriculture and Agri-Food Canada London, ON, Canada ; Department of Biology, University of Western Ontario London, ON, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant pathogens display impressive versatility in adapting to host immune systems. Pathogen effector proteins facilitate disease but can become avirulence (Avr) factors when the host acquires discrete recognition capabilities that trigger immunity. The mechanisms that lead to changes to pathogen Avr factors that enable escape from host immunity are diverse, and include epigenetic switches that allow for reuse or recycling of effectors. This perspective outlines possibilities of how epigenetic control of Avr effector gene expression may have arisen and persisted in filamentous plant pathogens, and how it presents special problems for diagnosis and detection of specific pathogen strains or pathotypes.

Indexed as

avirulencedetectiongene silencingimmunitypathotypeR-genetransposonvirulence

Identifiers

PMID25429296
PMCPMC4228847

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.