Evidence map›Paper›PMID 25428864›Full record

ArticleJournal of virology2015

SAMD9 is an innate antiviral host factor with stress response properties that can be antagonized by poxviruses.

Jia Liu, Grant McFadden

Abstract read
In one paragraph

Article in Journal of virology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed.

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  19. Emerging phenotypes linked to variants inFrontiers in endocrinology · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jia LiuDepartment of Microbiology and Immunology, University of Arkansas for Medical Sciences (UAMS), Little Rock, Arkansas, USA Center for Microbial Pathogenesis and Host Inflammatory Response, University of Arkansas for Medical Sciences (UAMS), Little Rock, Arkansas, USA jliu4@uams.edu.
Grant McFaddenDepartment of Molecular Genetics and Microbiology, University of Florida College of Medicine, Gainesville, Florida, USA.

Funding

Study of the Cell-specific Inflammasome Responses During Defense Against Gram-negative BacteriaP20GM103625 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI AACHOUI, YOUSSEF · 2012 to 2021
$21.5M
Studies in Poxvirus Host Range Genes and TropismR01AI080607 · NIAID · UNIVERSITY OF FLORIDA · PI RAHMAN, MASMUDUR MOHAMMED · 2009 to 2025
$5.6M
Manipulation of inflammasomes and NF-kB signaling in human myeloid cells by MyxomR01AI100987 · NIAID · UNIVERSITY OF FLORIDA · PI MCFADDEN, GRANT · 2013 to 2017
$1.9M
Studies in Poxvirus Evasion of SAMD9 PathwayR01AI139106 · NIAID · UNIV OF ARKANSAS FOR MED SCIS · PI LIU, JIA · 2019 to 2023
$1.9M
Characterization of Antiviral Functions of Sterile Alpha Motif-Containing DomainK22AI099184 · NIAID · UNIV OF ARKANSAS FOR MED SCIS · PI LIU, JIA · 2013 to 2014
$268k
NIAID NIH HHS K22 AI099184NIAID NIH HHS R01 AI080607NIAID NIH HHS R01-AI080607NIAID NIH HHS R01 AI100987NIAID NIH HHS R01 AI139106NIGMS NIH HHS P20 GM103625NIGMS NIH HHS P20-GM103625PHS HHS K22-A99184
6 · The paper itself

Abstract

We show that SAMD9 is an innate host antiviral stress response element that participates in the formation of antiviral granules. Poxviruses, myxoma virus and vaccinia virus specifically, utilize a virus-encoded host range factor(s), such as a member of the C7L superfamily, to antagonize SAMD9 to prevent granule formation in a eukaryotic initiation factor 2α (eIF2α)-independent manner. When SAMD9 is stimulated due to failure of the viral antagonism during infection, the resulting antiviral granules exhibit properties different from those of the canonical stress granules.

Indexed as

Immunity, InnateAntiviral AgentsHeLa CellsHumansIntracellular Signaling Peptides and ProteinsPoxviridaeProteinsAntiviral AgentsIntracellular Signaling Peptides and ProteinsProteinsSAMD9 protein, human

Identifiers

PMID25428864
PMCPMC4300762

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.