Evidence map›Paper›PMID 25428148›Full record

ArticleJournal of clinical microbiology2015

Characteristics of emerging human-pathogenic Escherichia coli O26:H11 strains isolated in France between 2010 and 2013 and carrying the stx2d gene only.

Sabine Delannoy, Patricia Mariani-Kurkdjian, Stephane Bonacorsi, Sandrine Liguori, Patrick Fach

Abstract read
In one paragraph

Article in Journal of clinical microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

  1. Article
  2. An outbreak of Shiga toxin-producingEpidemiology and infection · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Population Analysis of O26 Shiga Toxin-ProducingFrontiers in cellular and infection microbiology · 2022
    Article
  7. Epidemiology and genomic analysis of Shiga toxin-producingJournal of medical microbiology · 2021
    Article
  8. Article
  9. Article
  10. Molecular characteristics ofEmerging microbes & infections · 2020
    Article
  11. Preliminary data on the antimicrobial effect ofItalian journal of food safety · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Presence of Shiga Toxin-ProducingMicroorganisms · 2018
    Article
  19. Article
  20. Variability in CharacterizingMicroorganisms · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sabine DelannoyFrench Agency for Food, Environmental, and Occupational Health and Safety, Food Safety Laboratory, Platform IdentyPath, Maisons-Alfort, France.
Patricia Mariani-KurkdjianAP-HP, Hôpital Robert-Debré, Service de Microbiologie, CNR Associé Escherichia coli, Paris, France IAME, UMR 1137, INSERM, Paris, France IAME, UMR 1137, Université Paris Diderot, Sorbonne Paris Cité, Paris, France.
Stephane BonacorsiAP-HP, Hôpital Robert-Debré, Service de Microbiologie, CNR Associé Escherichia coli, Paris, France IAME, UMR 1137, INSERM, Paris, France IAME, UMR 1137, Université Paris Diderot, Sorbonne Paris Cité, Paris, France.
Sandrine LiguoriAP-HP, Hôpital Robert-Debré, Service de Microbiologie, CNR Associé Escherichia coli, Paris, France Institut de Veille Sanitaire, Saint Maurice, France.
Patrick FachFrench Agency for Food, Environmental, and Occupational Health and Safety, Food Safety Laboratory, Platform IdentyPath, Maisons-Alfort, France patrick.fach@anses.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Strains of Escherichia coli O26:H11 that were positive for stx2 alone (n = 23), which were not epidemiologically related or part of an outbreak, were isolated from pediatric patients in France between 2010 and 2013. We were interested in comparing these strains with the new highly virulent stx2a-positive E. coli O26 clone sequence type 29 (ST29) that has emerged recently in Europe, and we tested them by multilocus sequence typing (MLST), stx2 subtyping, clustered regularly interspaced short palindromic repeat (CRISPR) sequencing, and plasmid (ehxA, katP, espP, and etpD) and chromosomal (Z2098, espK, and espV) virulence gene profiling. We showed that 16 of the 23 strains appeared to correspond to this new clone, but the characteristics of 12 strains differed significantly from the previously described characteristics, with negative results for both plasmid and chromosomal genetic markers. These 12 strains exhibited a ST29 genotype and related CRISPR arrays (CRISPR2a alleles 67 or 71), suggesting that they evolved in a common environment. This finding was corroborated by the presence of stx2d in 7 of the 12 ST29 strains. This is the first time that E. coli O26:H11 carrying stx2d has been isolated from humans. This is additional evidence of the continuing evolution of virulent Shiga toxin-producing E. coli (STEC) O26 strains. A new O26:H11 CRISPR PCR assay, SP_O26_E, has been developed for detection of these 12 particular ST29 strains of E. coli O26:H11. This test is useful to better characterize the stx2-positive O26:H11 clinical isolates, which are associated with severe clinical outcomes such as bloody diarrhea and hemolytic uremic syndrome.

Indexed as

SerogroupChildChild, PreschoolChromosomes, BacterialCommunicable Diseases, EmergingEscherichia coli InfectionsFemaleFranceGenotypeHumansInfantMaleMolecular TypingPlasmidsSequence Analysis, DNAShiga-Toxigenic Escherichia coliShiga Toxin 2Virulence Factors

Identifiers

PMID25428148
PMCPMC4298503

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.