Evidence map›Paper›PMID 25428146›Full record

ArticleJournal of clinical microbiology2015

Gordonia species as emerging causes of continuous-ambulatory-peritoneal-dialysis-related peritonitis identified by 16S rRNA and secA1 gene sequencing and matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS).

Jimmy Y W Lam, Alan K L Wu, Wai-Shing Leung, Ingrid Cheung, Chi-Ching Tsang, Jonathan H K Chen, Jasper F W Chan, Cindy W S Tse, Rodney A Lee, Susanna K P Lau and 1 more

Open access · greenAbstract readCase Reports
In one paragraph

Article in Journal of clinical microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Focusing onAntibiotics (Basel, Switzerland) · 2023
    Article
  5. Access microbiology · 2023
    Article
  6. Methods of IdentifyingPathogens (Basel, Switzerland) · 2022
    Review
  7. Article
  8. From NTM (Diagnostics (Basel, Switzerland) · 2022
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. JMM case reports · 2017
    Article
  14. Review
  15. Sternal wound infection caused byJMM case reports · 2016
    Article
  16. Article
  17. Sternal osteomyelitis byAnnals of cardiac anaesthesia
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Jimmy Y W LamDepartment of Clinical Pathology, Pamela Youde Nethersole Eastern Hospital, Hong Kong.
Alan K L WuDepartment of Clinical Pathology, Pamela Youde Nethersole Eastern Hospital, Hong Kong wukla@ha.org.hk pcywoo@hku.hk.
Wai-Shing LeungDepartment of Medicine and Geriatrics, Princess Margaret Hospital, Hong Kong.
Ingrid CheungDepartment of Pathology, Kwong Wah Hospital, Hong Kong.
Chi-Ching TsangDepartment of Microbiology, The University of Hong Kong, Hong Kong.ORCID http://orcid.org/0000-0001-6705-2866
Jonathan H K ChenDepartment of Microbiology, The University of Hong Kong, Hong Kong.ORCID http://orcid.org/0000-0002-7510-1696
Jasper F W ChanDepartment of Microbiology, The University of Hong Kong, Hong Kong Research Centre of Infection and Immunology, The University of Hong Kong, Hong Kong State Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong, Hong Kong Carol Yu Centre for Infection, The University of Hong Kong, Hong Kong.
Cindy W S TseDepartment of Pathology, Kwong Wah Hospital, Hong Kong.
Rodney A LeeDepartment of Clinical Pathology, Pamela Youde Nethersole Eastern Hospital, Hong Kong.
Susanna K P LauDepartment of Microbiology, The University of Hong Kong, Hong Kong Research Centre of Infection and Immunology, The University of Hong Kong, Hong Kong State Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong, Hong Kong Carol Yu Centre for Infection, The University of Hong Kong, Hong Kong.
Patrick C Y WooDepartment of Microbiology, The University of Hong Kong, Hong Kong Research Centre of Infection and Immunology, The University of Hong Kong, Hong Kong State Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong, Hong Kong Carol Yu Centre for Infection, The University of Hong Kong, Hong Kong wukla@ha.org.hk pcywoo@hku.hk.
University of Hong Kong · HKPamela Youde Nethersole Eastern Hospital · CNKwong Wah Hospital · CNHospital Authority · HK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We report here four cases of continuous ambulatory peritoneal dialysis-related peritonitis caused by three different species of Gordonia. The portal of entry was likely through Tenckhoff catheters. 16S rRNA and secA1 gene sequencing are so far the most reliable methods for the accurate identification of Gordonia species.

Indexed as

Actinomycetales InfectionsAdenosine TriphosphatasesAgedBacterial ProteinsCluster AnalysisFemaleGordonia BacteriumHumansMaleMembrane Transport ProteinsMiddle AgedMolecular Diagnostic TechniquesMolecular Sequence DataPeritoneal DialysisPeritonitisPhylogenyAdenosine TriphosphatasesBacterial ProteinsMembrane Transport ProteinsRNA, Ribosomal, 16SSecA ProteinsSEC Translocation Channels

Identifiers

PMID25428146
PMCPMC4298495
OpenAlexW2036976681

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.