ArticlePloS one2014
Echinochloa chloroplast genomes: insights into the evolution and taxonomic identification of two weedy species.
Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
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Who cites it
23 citing papers in PubMed, 62 citations in OpenAlex.
- The complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2025Article
- Survey ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2024Article
- Review
- Dig up tall fescue plastid genomes for the identification of morphotype-specific DNA variants.BMC genomics · 2023Article
- Poaceae Chloroplast Genome Sequencing: Great Leap Forward in Recent Ten Years.Current genomics · 2023Review
- Taxonomy of the weed species of the genusPhytoKeys · 2022Review
- Green giant-a tiny chloroplast genome with mighty power to produce high-value proteins: history and phylogeny.Plant biotechnology journal · 2021Review
- The complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2021Article
- The complete chloroplast genome of theMitochondrial DNA. Part B, Resources · 2020Article
- Barnyard Millet for Food and Nutritional Security: Current Status and Future Research Direction.Frontiers in genetics · 2020Review
- Effects of drought-stress on seed germination and growth physiology of quinclorac-resistant Echinochloa crusgalli.PloS one · 2019Article
- Characterization of the complete chloroplast genome of endangered CycadsMitochondrial DNA. Part B, Resources · 2018Article
- The complete chloroplast genome sequence of the biofuel plant Sacha Inchi,Mitochondrial DNA. Part B, Resources · 2018Article
- Molecular Phylogeny and Dating of Forsythieae (Oleaceae) Provide Insight into the Miocene History of Eurasian Temperate Shrubs.Frontiers in plant science · 2018Article
- A 250 plastome phylogeny of the grass family (Poaceae): topological support under different data partitions.PeerJ · 2018Article
- The Complete Chloroplast Genome Sequences of Fritillaria ussuriensis Maxim. and Fritillaria cirrhosa D. Don, and Comparative Analysis with Other Fritillaria Species.Molecules (Basel, Switzerland) · 2017Article
- The complete chloroplast genome sequence of the threatened trident mapleMitochondrial DNA. Part B, Resources · 2017Article
- NOVOPlasty: de novo assembly of organelle genomes from whole genome data.Nucleic acids research · 2017Article
- Complete chloroplast genome sequences of six lines ofMitochondrial DNA. Part B, Resources · 2017Article
- Chloroplast genomes: diversity, evolution, and applications in genetic engineering.Genome biology · 2016Review
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Authors and funding
15 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The genus Echinochloa (Poaceae) includes numerous problematic weeds that cause the reduction of crop yield worldwide. To date, DNA sequence information is still limited in the genus Echinochloa. In this study, we completed the entire chloroplast genomes of two Echinochloa species (Echinochloa oryzicola and Echinochloa crus-galli) based on high-throughput sequencing data from their fresh green leaves. The two Echinochloa chloroplast genomes are 139,891 and 139,800 base pairs in length, respectively, and contain 131 protein-coding genes, 79 indels and 466 substitutions helpful for discrimination of the two species. The divergence between the genus Echinochloa and Panicum occurred about 21.6 million years ago, whereas the divergence between E. oryzicola and E. crus-galli chloroplast genes occurred about 3.3 million years ago. The two reported Echinochloa chloroplast genome sequences contribute to better understanding of the diversification of this genus.
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