Evidence map›Paper›PMID 25426855›Full record

ArticlePloS one2014

The lineage-specific evolution of aquaporin gene clusters facilitated tetrapod terrestrial adaptation.

Roderick Nigel Finn, François Chauvigné, Jón Baldur Hlidberg, Christopher P Cutler, Joan Cerdà

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 145 citations in OpenAlex.

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  12. Chromosomal DNA sequences of the Pacific saury genome: versatile resources for fishery science and comparative biology.DNA research : an international journal for rapid publication of reports on genes and genomes · 2024
    Article
  13. Evidence That Aquaporin 11 (AQP11) in the Spiny Dogfish (International journal of molecular sciences · 2024
    Article
  14. Article
  15. Review
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  17. Article
  18. Genome-Wide Identification ofInternational journal of molecular sciences · 2023
    Article
  19. Article
  20. Article

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Roderick Nigel FinnDepartment of Biology, University of Bergen, Bergen, Norway; Institute of Marine Research, Bergen, Norway.
François ChauvignéDepartment of Biology, University of Bergen, Bergen, Norway; Institut de Recerca i Tecnologia Agroalimentàries (IRTA)-Institut de Ciències del Mar, CSIC, Barcelona, Spain.
Jón Baldur Hlidbergwww.fauna.is, Reykjavik, Iceland.
Christopher P CutlerDepartment of Biology, Georgia Southern University, Statesboro, Georgia, United States of America; Mount Desert Island Biological Laboratory, Salisbury Cove, Maine, United States of America.
Joan CerdàInstitut de Recerca i Tecnologia Agroalimentàries (IRTA)-Institut de Ciències del Mar, CSIC, Barcelona, Spain.
Institut de Ciències del Mar · ESMount Desert Island Biological Laboratory · USUniversity of Bergen · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A major physiological barrier for aquatic organisms adapting to terrestrial life is dessication in the aerial environment. This barrier was nevertheless overcome by the Devonian ancestors of extant Tetrapoda, but the origin of specific molecular mechanisms that solved this water problem remains largely unknown. Here we show that an ancient aquaporin gene cluster evolved specifically in the sarcopterygian lineage, and subsequently diverged into paralogous forms of AQP2, -5, or -6 to mediate water conservation in extant Tetrapoda. To determine the origin of these apomorphic genomic traits, we combined aquaporin sequencing from jawless and jawed vertebrates with broad taxon assembly of >2,000 transcripts amongst 131 deuterostome genomes and developed a model based upon Bayesian inference that traces their convergent roots to stem subfamilies in basal Metazoa and Prokaryota. This approach uncovered an unexpected diversity of aquaporins in every lineage investigated, and revealed that the vertebrate superfamily consists of 17 classes of aquaporins (Aqp0 - Aqp16). The oldest orthologs associated with water conservation in modern Tetrapoda are traced to a cluster of three aqp2-like genes in Actinistia that likely arose >500 Ma through duplication of an aqp0-like gene present in a jawless ancestor. In sea lamprey, we show that aqp0 first arose in a protocluster comprised of a novel aqp14 paralog and a fused aqp01 gene. To corroborate these findings, we conducted phylogenetic analyses of five syntenic nuclear receptor subfamilies, which, together with observations of extensive genome rearrangements, support the coincident loss of ancestral aqp2-like orthologs in Actinopterygii. We thus conclude that the divergence of sarcopterygian-specific aquaporin gene clusters was permissive for the evolution of water conservation mechanisms that facilitated tetrapod terrestrial adaptation.

Indexed as

Biological EvolutionMultigene FamilyAdaptation, PhysiologicalAnimalsAquaporinsBayes TheoremEvolution, MolecularPhylogenyVertebratesAquaporins

Identifiers

PMID25426855
PMCPMC4245216
OpenAlexW2045426130

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.