Evidence map›Paper›PMID 25426020›Full record

ArticleFrontiers in molecular neuroscience2014

Defining the nociceptor transcriptome.

Matthew Thakur, Megan Crow, Natalie Richards, Gareth I J Davey, Emma Levine, Jayne H Kelleher, Chibeza C Agley, Franziska Denk, Stephen D R Harridge, Stephen B McMahon

Abstract read
In one paragraph

Article in Frontiers in molecular neuroscience, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed.

  1. Review
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  6. A neuron type-specific microexon inbioRxiv : the preprint server for biology · 2025
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  10. Renal interoception in health and disease.Autonomic neuroscience : basic & clinical · 2024
    Review
  11. Article
  12. Article
  13. Review
  14. Neuroimmune Interactions in the Intestine.Annual review of immunology · 2024
    Review
  15. Article
  16. Engineering Sensory Ganglion Multicellular System to Model Tissue Nerve Ingrowth.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  17. Brain communications · 2024
    Article
  18. Article
  19. Article
  20. Article

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Matthew ThakurWolfson Centre for Age-Related Diseases, King's College London London, UK.
Megan CrowWolfson Centre for Age-Related Diseases, King's College London London, UK.
Natalie RichardsWolfson Centre for Age-Related Diseases, King's College London London, UK.
Gareth I J DaveyWolfson Centre for Age-Related Diseases, King's College London London, UK.
Emma LevineWolfson Centre for Age-Related Diseases, King's College London London, UK.
Jayne H KelleherWolfson Centre for Age-Related Diseases, King's College London London, UK.
Chibeza C AgleyCentre of Human and Aerospace Physiological Sciences, King's College London London, UK.
Franziska DenkWolfson Centre for Age-Related Diseases, King's College London London, UK.
Stephen D R HarridgeCentre of Human and Aerospace Physiological Sciences, King's College London London, UK.
Stephen B McMahonWolfson Centre for Age-Related Diseases, King's College London London, UK.

Funding

Medical Research Council G0900747Wellcome Trust 097903Wellcome Trust 102645
6 · The paper itself

Abstract

Unbiased "omics" techniques, such as next generation RNA-sequencing, can provide entirely novel insights into biological systems. However, cellular heterogeneity presents a significant barrier to analysis and interpretation of these datasets. The neurons of the dorsal root ganglia (DRG) are an important model for studies of neuronal injury, regeneration and pain. The majority of investigators utilize a dissociated preparation of whole ganglia when studying cellular and molecular function. We demonstrate that the standard methods for producing these preparations gives a 10%-neuronal mixture of cells, with the remainder of cells constituting satellite glia and other non-neuronal cell types. Using a novel application of magnetic purification, we consistently obtain over 95% pure, viable neurons from adult tissue, significantly enriched for small diameter nociceptors expressing the voltage gated ion channel Nav1.8. Using genome-wide RNA-sequencing we compare the currently used (10% neuronal) and pure (95% nociceptor) preparations and find 920 genes enriched. This gives an unprecedented insight into the molecular composition of small nociceptive neurons in the DRG, potentially altering the interpretation of previous studies performed at the tissue level, and indicating a number of novel markers of this widely-studied population of cells. We anticipate that the ease of use, affordability and speed of this technique will see it become widely adopted, delivering a greatly improved capacity to study the roles of nociceptors in health and disease.

Indexed as

dorsal root ganglionnociceptionnociceptorspainperipheral nervous systemregenerationRNA-sequencingsomatosensation

Identifiers

PMID25426020
PMCPMC4227287

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.