Evidence map›Paper›PMID 25424711›Full record

ArticleEuropean journal of human genetics : EJHG2015

Further delineation of the KAT6B molecular and phenotypic spectrum.

Tamsin Gannon, Rahat Perveen, Hélene Schlecht, Simon Ramsden, Beverley Anderson, Bronwyn Kerr, Ruth Day, Siddharth Banka, Mohnish Suri, Siren Berland and 50 more

Open access · bronzeAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
  2. Article
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  4. Article
  5. Article
  6. Article
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  9. Guidelines for Newborn Screening of Congenital Hypothyroidism (2021 Revision).Clinical pediatric endocrinology : case reports and clinical investigations : official journal of the Japanese Society for Pediatric Endocrinology · 2023
    Article
  10. Knowns and unknowns about congenital hypothyroidism: 2022 update.Clinical pediatric endocrinology : case reports and clinical investigations : official journal of the Japanese Society for Pediatric Endocrinology · 2023
    Review
  11. Review
  12. Delineation of a Phenotype Caused by aMolecular syndromology · 2022
    Article
  13. Article
  14. Article
  15. Article
  16. Deficiency of Intellectual Disability-Related GeneFrontiers in cell and developmental biology · 2021
    Article
  17. Further delineation of the clinical spectrum of KAT6B disorders and allelic series of pathogenic variants.Genetics in medicine : official journal of the American College of Medical Genetics · 2020
    Review
  18. Frontiers in pediatrics · 2020
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

60 authors at 20 institutions in 16 countries.

Tamsin GannonManchester Centre For Genomic Medicine, University of Manchester, St Mary's Hospital, Manchester Academic Health Science Centre, Manchester, UK.
Rahat PerveenManchester Centre For Genomic Medicine, University of Manchester, St Mary's Hospital, Manchester Academic Health Science Centre, Manchester, UK.
Hélene SchlechtManchester Centre For Genomic Medicine, University of Manchester, St Mary's Hospital, Manchester Academic Health Science Centre, Manchester, UK.
Simon RamsdenManchester Centre For Genomic Medicine, University of Manchester, St Mary's Hospital, Manchester Academic Health Science Centre, Manchester, UK.
Beverley AndersonManchester Centre For Genomic Medicine, University of Manchester, St Mary's Hospital, Manchester Academic Health Science Centre, Manchester, UK.
Bronwyn KerrManchester Centre For Genomic Medicine, University of Manchester, St Mary's Hospital, Manchester Academic Health Science Centre, Manchester, UK.
Ruth DayManchester Centre For Genomic Medicine, University of Manchester, St Mary's Hospital, Manchester Academic Health Science Centre, Manchester, UK.
Siddharth BankaManchester Centre For Genomic Medicine, University of Manchester, St Mary's Hospital, Manchester Academic Health Science Centre, Manchester, UK.
Mohnish SuriDepartment of Clinical Genetics, City Hospital, Nottingham, UK.
Siren BerlandCentre for Medical Genetics and Molecular Medicine, Haukeland University Hospital, Bergen, Norway.
Michael GabbettGenetic Health Queensland and University of Queensland. Royal Brisbane and Women's Hospital, PO Box Herston QLD, Australia.
Alan MaDepartment of Clinical Genetics, Children's Hospital at Westmead, Sydney, Australia.
Stan LyonnetDépartement de Génétique, Université Paris Descartes-Sorbonne Paris Cité, INSERM UMR 1163, Imagine Institute, Hôpital Necker Enfants Malades, AP-HP, 24, boulevard de Montparnasse, Paris.
Valerie Cormier-DaireDépartement de Génétique, Université Paris Descartes-Sorbonne Paris Cité, INSERM UMR 1163, Imagine Institute, Hôpital Necker Enfants Malades, AP-HP, 24, boulevard de Montparnasse, Paris.
Rüstem YilmazInstitute of Human Genetics, University of Ulm, Ulm, Germany.
Guntram BorckInstitute of Human Genetics, University of Ulm, Ulm, Germany.
Dagmar WieczorekInstitut fur Humangenetik, Universitätsklinikum Essen, Essen, Germany.
Britt-Marie AnderlidInstitute of Molecular Medicine and Surgery, Centre for Molecular Medicine, Karolinska Institut and Clinical Genetic Department, Karolinska University Hospital, Stockholm, Sweden.
Sarah SmithsonClinical Genetics, University Hospitals, Bristol, UK.
Julie VogtClinical Genetics, Birmingham Women's Hospital NHS Foundation Trust, Birmingham, UK.
Heather Moore-BartonDepartment of Clinical Genetics, Children's Hospital at Westmead, Sydney, Australia.
Pelin Ozlem Simsek-KiperClinical Genetics, Hacettepe University, Ihsan Dogramaci Children's Hospital, Ankara, Turkey.
Isabelle MaystadtCentre de Génétique Humaine, Institut de Pathologie et de Génétique, Gosselies, Belgium.
Anne DestréeCentre de Génétique Humaine, Institut de Pathologie et de Génétique, Gosselies, Belgium.
Jessica BucherDivision of Genetics, Birth Defects and Metabolism, Children's Hospital of Chicago, Chicago, IL, USA.
Brad AngleDivision of Genetics, Birth Defects and Metabolism, Children's Hospital of Chicago, Chicago, IL, USA.
Shehla MohammedClinical Genetics, Guys Hospital, Great Maze Pond, London.
Emma WakelingNorth West Thames Regional Genetics Service, North West London Hospitals NHS Trust, Harrow, UK.
Sue PriceClinical Genetics, Northampton General Hospital, Cliftonville, Northampton, England.
Amihood SingerPaediatrics and Medical Genetics, Barzilai Medical Centre, Ashkelon, Israel.
Yves SznajerCenter for Human Genetics, Clinique Universitaire St-Luc, Université Catholique de Louvain, Brussels, Belgium.
Annick ToutainService de Génétique, Centre Hospitalier Universitaire, Tours, France.
Damien HayeService de Génétique, Centre Hospitalier Universitaire, Tours, France.
Ruth Newbury-EcobClinical Genetics, University Hospitals, Bristol, UK.
Melanie FradinService de Génétique Medicale CHU Rennes, Université de Rennes, Rennes, France.
Julie McGaughranGenetic Health Queensland and University of Queensland. Royal Brisbane and Women's Hospital, PO Box Herston QLD, Australia.
Beyhan TuysuzDepartment of Pediatric Genetics, Cerrahpaşa Medical School, Istanbul University, Istanbul, Turkey.
Mark TeinClinical Genetics, Birmingham Women's Hospital, Birmingha, UK.
Katelijne BoumanDepartment of Genetics, University of Groningen, University Medical Centre, Groningen, The Netherlands.
Tabib DabirMedical Genetics, Belfast City Hospital, Belfast, Northern Ireland.
Jenneke Van den EndeCentre For Medical Genetics, Prins Boudewijnlaan 43, Edegem, Belgium.
Ho Ming LukClinical Genetic Service, Department of Health, Hong Kong, China.
Daniela T PilzInstitute of Medical Genetics, University Hospital of Wales, Cardif, Wales.
Jacqueline EasonDepartment of Clinical Genetics, City Hospital, Nottingham, UK.
Sally DaviesInstitute of Medical Genetics, University Hospital of Wales, Cardif, Wales.
Willie ReardonNational Centre For Medical Genetics, Our Lady's Hospital For Sick Children, Dublin, Ireland.
Livia GaravelliClinical Genetics Unit, Obstetric and Pediatric Department, Arcispedale S. Maria Nuova, Istitu di Ricovero e Cura a Carattere Scientifico, Reggio, Emilia, Italy.
Orsetta ZuffardiInstitute of Human Genetics, University of Pavia, Pavia, Italy.
Koen DevriendtUZ Leuven, Campus Gasthuisberg, Leuven, Belgium.
Ruth ArmstrongEast Anglian Medical Genetics Service, Addenbrookes Hospital, Cambridge, MA, USA.
Diana JohnsonDepartment of Clinical Genetics, Sheffield Children's Hospital, Sheffield, UK.
Martine Doco-FenzyService de Génétique, HMB-CHU Reims, Reims, France.
Emilia BijlsmaLeiden University Medical Centre, Leiden, The Netherlands.
Sheila UngerService de Génétique Médicale, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland.
Hermine E Veenstra-KnolDepartment of Genetics, University of Groningen, University Medical Centre, Groningen, The Netherlands.
Jürgen KohlhaseCentre For Human Genetics, Freiburg, Germany.
Ivan F M LoClinical Genetic Service, Department of Health, Hong Kong, China.
DDD study
Janine SmithDepartment of Clinical Genetics, Children's Hospital at Westmead, Sydney, Australia.
Jill Clayton-SmithManchester Centre For Genomic Medicine, University of Manchester, St Mary's Hospital, Manchester Academic Health Science Centre, Manchester, UK.
Manchester Academic Health Science Centre · GBChildren's Hospital at Westmead · AUInstitute of Pathology and Genetics · BEBristol Hospital · USCliniques Universitaires Saint-Luc · BEComer Children's Hospital · USDélégation Paris 5 · FRDepartment of Health · CNKarolinska University Hospital · SERoyal Brisbane and Women's Hospital · AUThe University of Queensland · AUUniversität Ulm · DEUniversity Hospital of Wales · GBUniversity Medical Center Groningen · NLUniversity of Groningen · NLAmgen (United Kingdom) · GBBirmingham Women's Hospital · GBCancer Research UK Clinical Trials Unit · GBCentre For Human Genetics · INCentre Hospitalier Universitaire de Reims · FR

Funding

Wellcome Trust 091986Wellcome Trust WT098051
6 · The paper itself

Abstract

KAT6B sequence variants have been identified previously in both patients with the Say-Barber-Biesecker type of blepharophimosis mental retardation syndromes (SBBS) and in the more severe genitopatellar syndrome (GPS). We report on the findings in a previously unreported group of 57 individuals with suggestive features of SBBS or GPS. Likely causative variants have been identified in 34/57 patients and were commonly located in the terminal exons of KAT6B. Of those where parental samples could be tested, all occurred de novo. Thirty out of thirty-four had truncating variants, one had a missense variant and the remaining three had the same synonymous change predicted to affect splicing. Variants in GPS tended to occur more proximally to those in SBBS patients, and genotype/phenotype analysis demonstrated significant clinical overlap between SBBS and GPS. The de novo synonymous change seen in three patients with features of SBBS occurred more proximally in exon 16. Statistical analysis of clinical features demonstrated that KAT6B variant-positive patients were more likely to display hypotonia, feeding difficulties, long thumbs/great toes and dental, thyroid and patella abnormalities than KAT6B variant-negative patients. The few reported patients with KAT6B haploinsufficiency had a much milder phenotype, though with some features overlapping those of SBBS. We report the findings in a previously unreported patient with a deletion of the KAT6B gene to further delineate the haploinsufficiency phenotype. The molecular mechanisms giving rise to the SBBS and GPS phenotypes are discussed.

Indexed as

ExonsMutationBlepharophimosisChild, PreschoolCongenital HypothyroidismCraniofacial AbnormalitiesDiagnosis, DifferentialDNA Mutational AnalysisExomeFaciesFemaleGene ExpressionGenetic Association StudiesGenotypeHeart Defects, CongenitalHistone AcetyltransferasesHistone AcetyltransferasesKAT6B protein, human

Identifiers

PMID25424711
PMCPMC4351891
OpenAlexW1975608491

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.