ArticleBMC plant biology2014
Regulatory interplay between soybean root and soybean cyst nematode during a resistant and susceptible reaction.
Article in BMC plant biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
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22 citing papers in PubMed, 37 citations in OpenAlex.
- RNA tomography reveals spatial gene expression maps of Arabidopsis thaliana roots infected with Heterodera schachtii.The New phytologist · 2026Article
- Multi-omics analysis identified the GmUGT88A1 gene, which coordinately regulates soybean resistance to cyst nematode and isoflavone content.Plant biotechnology journal · 2025Article
- Species-specific microRNA discovery and target prediction in the soybean cyst nematode.Scientific reports · 2023Article
- Article
- Functional Characterization of Ubiquitination Genes in the Interaction of Soybean-International journal of molecular sciences · 2022Article
- Kinase-dead mutation: A novel strategy for improving soybean resistance to soybean cyst nematode Heterodera glycines.Molecular plant pathology · 2022Article
- Article
- Isolation and identification of induced systemic resistance determinants from Bacillus simplex Sneb545 against Heterodera glycines.Scientific reports · 2020Article
- Early transcriptional responses to soybean cyst nematode HG Type 0 show genetic differences among resistant and susceptible soybeans.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020Article
- iTRAQ-Based Proteomic Analysis Reveals the Role of the Biological Control Agent,Frontiers in plant science · 2020Article
- Dissection of soybean populations according to selection signatures based on whole-genome sequences.GigaScience · 2019Article
- Molecular Basis of Soybean Resistance to Soybean Aphids and Soybean Cyst Nematodes.Plants (Basel, Switzerland) · 2019Review
- Soybean root transcriptome profiling reveals a nonhost resistant response during Heterodera glycines infection.PloS one · 2019Article
- Genome-wide analysis of genes encoding core components of the ubiquitin system in soybean (Glycine max) reveals a potential role for ubiquitination in host immunity against soybean cyst nematode.BMC plant biology · 2018Article
- Signal Transduction in Plant⁻Nematode Interactions.International journal of molecular sciences · 2018Review
- Heat Shock Factor HsfA1a Is Essential forPlant physiology · 2018Article
- RNA-seq data comparisons of wild soybean genotypes in response to soybean cyst nematode (Genomics data · 2017Article
- Comparative RNA-Seq Analysis Uncovers a Complex Regulatory Network for Soybean Cyst Nematode Resistance in Wild Soybean (Glycine soja).Scientific reports · 2017Article
- Genome-wide identification of soybean microRNA responsive to soybean cyst nematodes infection by deep sequencing.BMC genomics · 2017Article
- Comparative Transcriptome Analysis of Resistant and Susceptible Common Bean Genotypes in Response to Soybean Cyst Nematode Infection.PloS one · 2016Article
Corrections and comments
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Authors and funding
2 authors at 2 institutions in 1 country.
Funding
Abstract
backgroundPlant-parasitic nematodes (PPNs) are obligate parasites that feed on the roots of living host plants. Often, these nematodes can lay hundreds of eggs, each capable of surviving without a host for as long as 12 years. When it comes to wreaking havoc on agricultural yield, few nematodes can compare to the soybean cyst nematode (SCN). Quantifying soybean (Glycine max) transcription factor binding sites (TFBSs) during a late-stage SCN resistant and susceptible reaction can shed light onto the systematic interplay between host and pathogen, thereby elucidating underlying cis-regulatory mechanisms.
resultsWe sequenced the soybean root transcriptome at 6 and 8 days upon independent inoculation with a virulent and avirulent SCN population. Genes such as β-1,4 glucanase, chalcone synthase, superoxide dismutase and various heat shock proteins (HSPs) exhibited reaction-specific expression profiles. Several likely defense-response genes candidates were also identified which are believed to confer SCN resistance. To explore magnitude of TFBS representation during SCN pathogenesis, a multivariate statistical software identified 46 over-represented TFBSs which capture soybean regulatory dynamics across both reactions.
conclusionsOur results reveal a set of soybean TFBSs which are over-represented solely throughout a resistant and susceptible SCN reaction. This set furthers our understanding of soybean cis-regulatory dynamics by providing reaction-specific levels of over-representation at 6 and 8 days after inoculation (dai) with SCN.
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