Evidence map›Paper›PMID 25418993›Full record

ArticleCanadian journal of chemistry2013

Contribution of the empirical dispersion correction on the conformation of short alanine peptides obtained by gas-phase QM calculations.

Elisa Fadda, Robert J Woods

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Canadian journal of chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Protonated Asparaginyl-Alanine Decomposition: a TCID, SORI-CID, and Computational Analysis.Journal of the American Society for Mass Spectrometry · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Elisa FaddaSchool of Chemistry, National University of Ireland, Galway, University Road, Galway, Ireland.
Robert J WoodsSchool of Chemistry, National University of Ireland, Galway, University Road, Galway, Ireland; Complex Carbohydrate Research Center and Department of Chemistry, University of Georgia, Athens, GA 30602, USA.
Ollscoil na Gaillimhe – University of Galway · IEUniversity of Georgia · US

Funding

Integrating Experiment and Theory to Characterize Diagnostic Antibody SpecificityR01GM094919 · NIGMS · UNIVERSITY OF GEORGIA · PI WOODS, ROBERT J · 2010 to 2013
$1.7M
NIGMS NIH HHS R01 GM094919
6 · The paper itself

Abstract

In this work we analyze the effect of the inclusion of an empirical dispersion term to standard DFT (DFT-D) in the prediction of the conformational energy of the alanine dipeptide (Ala2) and in assessing the relative stabilities of short polyala-nine peptides in helical conformations, i.e., α and 3

Indexed as

ab initio and DFT calculationsalanine dipeptideempirical dispersion-corrected DFTpeptides structure and stabilityRamachandran plotshort polyalanine peptides

Identifiers

PMID25418993
PMCPMC4239032
OpenAlexW2061678485

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.