Evidence map›Paper›PMID 25418155›Full record

ArticleNature communications2014

Mechanistic insight into the interaction of BLM helicase with intra-strand G-quadruplex structures.

Sujoy Chatterjee, Jennifer Zagelbaum, Pavel Savitsky, Andreas Sturzenegger, Diana Huttner, Pavel Janscak, Ian D Hickson, Opher Gileadi, Eli Rothenberg

Open access · bronzeAbstract read
In one paragraph

Article in Nature communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 97 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 4 countries.

Sujoy ChatterjeeDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, MSB 394, 550 First Avenue, New York, New York 10016, USA.
Jennifer ZagelbaumDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, MSB 394, 550 First Avenue, New York, New York 10016, USA.
Pavel SavitskyGenome Integrity group, Structural Genomics Consortium, University of Oxford, Oxford OX3 7DQ, UK.
Andreas SturzeneggerInstitute of Molecular Cancer Research, University of Zurich, CH-8057 Zurich, Switzerland.
Diana Huttner1] NovoNordisk Foundation Center for Protein Research, University of Copenhagen, 2200 Copenhagen, Denmark [2] Department of Cellular and Molecular Medicine, University of Copenhagen, 2200 Copenhagen, Denmark.
Pavel JanscakInstitute of Molecular Cancer Research, University of Zurich, CH-8057 Zurich, Switzerland.
Ian D HicksonDepartment of Cellular and Molecular Medicine, University of Copenhagen, 2200 Copenhagen, Denmark.
Opher GileadiGenome Integrity group, Structural Genomics Consortium, University of Oxford, Oxford OX3 7DQ, UK.
Eli RothenbergDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, MSB 394, 550 First Avenue, New York, New York 10016, USA.
New York University · USUniversity of Copenhagen · DKUniversity of Zurich · CHGenomics (United Kingdom) · GBUniversity of Oxford · GB

Funding

PH REGULATION OF CONNEXIN43--INTERMEDIARY STEPSR01GM057691 · NIGMS · UPSTATE MEDICAL UNIVERSITY · PI DELMAR, MARIO · 1999 to 2016
$5.6M
Single-Molecule Studies of Human RECQ5 Helicase MechanismsR21GM110385 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ROTHENBERG, ELI · 2014 to 2014
$168k
NIGMS NIH HHS GM057691NIGMS NIH HHS GM110385NIGMS NIH HHS R01 GM057691NIGMS NIH HHS R21 GM110385Wellcome Trust 092809Wellcome Trust 092809/Z/10/Z
6 · The paper itself

Abstract

Bloom syndrome is an autosomal recessive disorder caused by mutations in the RecQ family helicase BLM that is associated with growth retardation and predisposition to cancer. BLM helicase has a high specificity for non-canonical G-quadruplex (G4) DNA structures, which are formed by G-rich DNA strands and play an important role in the maintenance of genomic integrity. Here we used single-molecule FRET to define the mechanism of interaction of BLM helicase with intra-stranded G4 structures. We show that the activity of BLM is substrate dependent, and highly regulated by a short-strand DNA (ssDNA) segment that separates the G4 motif from double-stranded DNA. We demonstrate cooperativity between the RQC and HRDC domains of BLM during binding and unfolding of the G4 structure, where the RQC domain interaction with G4 is stabilized by HRDC binding to ssDNA. We present a model that proposes a unique role for G4 structures in modulating the activity of DNA processing enzymes.

Indexed as

G-QuadruplexesBloom SyndromeCell LineDNA RepairDNA, Single-StrandedExodeoxyribonucleasesFluorescence Resonance Energy TransferHumansModels, GeneticProtein Structure, TertiaryRecQ HelicasesWerner Syndrome HelicaseBloom syndrome proteinDNA, Single-StrandedExodeoxyribonucleasesRecQ HelicasesWerner Syndrome HelicaseWRN protein, human

Identifiers

PMID25418155
PMCPMC4243535
OpenAlexW2005098652

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.