Evidence map›Paper›PMID 25418095›Full record

ArticleBiophysical journal2014

Ligand binding alters dimerization and sequestering of urokinase receptors in raft-mimicking lipid mixtures.

Yifan Ge, Amanda P Siegel, Rainer Jordan, Christoph A Naumann

Abstract read
In one paragraph

Article in Biophysical journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Roles of Membrane Domains in Integrin-Mediated Cell Adhesion.International journal of molecular sciences · 2020
    Review
  3. Article
  4. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Yifan GeDepartment of Chemistry and Chemical Biology, Indiana University-Purdue University, Indianapolis, Indiana.
Amanda P SiegelDepartment of Chemistry and Chemical Biology, Indiana University-Purdue University, Indianapolis, Indiana; Integrated Nanosystems Development Institute, Indiana University-Purdue University, Indianapolis, Indiana.
Rainer JordanMakromolekulare Chemie, TU Dresden, Dresden, Germany.
Christoph A NaumannDepartment of Chemistry and Chemical Biology, Indiana University-Purdue University, Indianapolis, Indiana; Integrated Nanosystems Development Institute, Indiana University-Purdue University, Indianapolis, Indiana. Electronic address: canauman@iupui.edu.
Indiana University – Purdue University Indianapolis · USTechnische Universität Dresden · DEUniversity of Indianapolis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lipid heterogeneities, such as lipid rafts, are widely considered to be important for the sequestering of membrane proteins in plasma membranes, thereby influencing membrane protein functionality. However, the underlying mechanisms of such sequestration processes remain elusive, in part, due to the small size and often transient nature of these functional membrane heterogeneities in cellular membranes. To overcome these challenges, here we report the sequestration behavior of urokinase receptor (uPAR), a glycosylphosphatidylinositol-anchored protein, in a planar model membrane platform with raft-mimicking lipid mixtures of well-defined compositions using a powerful optical imaging platform consisting of confocal spectroscopy XY-scans, photon counting histogram, and fluorescence correlation spectroscopy analyses. This methodology provides parallel information about receptor sequestration, oligomerization state, and lateral mobility with single molecule sensitivity. Most notably, our experiments demonstrate that moderate changes in uPAR sequestration are not only associated with modifications in uPAR dimerization levels, but may also be linked to ligand-mediated allosteric changes of these membrane receptors. Our data show that these modifications in uPAR sequestration can be induced by exposure to specific ligands (urokinase plasminogen activator, vitronectin), but not via adjustment of the cholesterol level in the planar model membrane system. Good agreement of our key findings with published results on cell membranes confirms the validity of our model membrane approach. We hypothesize that the observed mechanism of receptor translocation in the presence of raft-mimicking lipid mixtures is also applicable to other glycosylphosphatidylinositol-anchored proteins.

Indexed as

DimerizationLipid BilayersMembrane MicrodomainsPhospholipidsProtein BindingReceptors, Urokinase Plasminogen ActivatorSpectrum AnalysisLipid BilayersPhospholipidsReceptors, Urokinase Plasminogen Activator

Identifiers

PMID25418095
PMCPMC4223190
OpenAlexW1966277915

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.