Evidence map›Paper›PMID 25416559›Full record

ArticleCarcinogenesis2015

CYP2A6 reduced activity gene variants confer reduction in lung cancer risk in African American smokers--findings from two independent populations.

Catherine A Wassenaar, Yuanqing Ye, Qiuyin Cai, Melinda C Aldrich, Joanne Knight, Margaret R Spitz, Xifeng Wu, William J Blot, Rachel F Tyndale

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Carcinogenesis, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 1 pooled it
7.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 1 synthesis or guideline pooled it, 52 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Observational
  4. Article
  5. PharmVar GeneFocus: CYP2A6.Clinical pharmacology and therapeutics · 2024
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Divergent trends in lifetime drinking and smoking between Black and White Americans diagnosed with chronic pancreatitis.Pancreatology : official journal of the International Association of Pancreatology (IAP) ... [et al.] · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Lung cancer health disparities.Carcinogenesis · 2018
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 7 institutions in 2 countries.

Catherine A WassenaarDepartment of Pharmacology and Toxicology, The University of Toronto, Toronto, Ontario M5S 1A8, Canada.
Yuanqing YeDepartment of Epidemiology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Qiuyin CaiDivision of Epidemiology, Vanderbilt University School of Medicine, Nashville, TN 37203, USA.
Melinda C AldrichDivision of Epidemiology, Vanderbilt University School of Medicine, Nashville, TN 37203, USA, Department of Thoracic Surgery Vanderbilt University Medical Center, Nashville, TN, 37232, USA.
Joanne KnightCampbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, Toronto, Ontario M5T 1R8, Canada, Department of Psychiatry, The University of Toronto, Toronto, Ontario M5T 1R8, Canada.
Margaret R SpitzDepartment of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX 77030, USA and.
Xifeng WuDepartment of Epidemiology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
William J BlotDivision of Epidemiology, Vanderbilt University School of Medicine, Nashville, TN 37203, USA, International Epidemiology Institute, Rockville, MD 20850, USA.
Rachel F TyndaleDepartment of Pharmacology and Toxicology, The University of Toronto, Toronto, Ontario M5S 1A8, Canada, Campbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, Toronto, Ontario M5T 1R8, Canada, Department of Psychiatry, The University of Toronto, Toronto, Ontario M5T 1R8, Canada, r.tyndale@utoronto.ca.
Centre for Addiction and Mental Health · CAThe University of Texas MD Anderson Cancer Center · USBaylor College of Medicine · USInternational Epidemiology Institute · USUniversity of Toronto · CAVanderbilt University · USVanderbilt University Medical Center · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI DIANE BODURKA · 1985 to 2026
$290.8M
Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Ben Ho Park · 1995 to 2026
$172.8M
Southern Community Cohort StudyR01CA092447 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BLOT, WILLIAM J., ZHENG, WEI · 2001 to 2015
$74.0M
UNIVERSITY OF TEXAS--SPORE IN LUNG CANCERP50CA070907 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI HEYMACH, JOHN V. · 1996 to 2024
$57.4M
University of Toronto Coordinating Genetics Core & Clinical Trial SiteU01DA020830 · NIDA · UNIVERSITY OF PENNSYLVANIA · PI LERMAN, CARYN · 2005 to 2014
$22.4M
Inflammation Genes and Lung Cancer RiskR01CA127219 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI SPITZ, MARGARET R · 2008 to 2013
$3.1M
Unraveling Genetic Determinants of Lung Cancer Risk in African AmericansK07CA172294 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI ALDRICH, MELINDA · 2013 to 2017
$801k
Canadian Institutes of Health Research MOP86471Canadian Institutes of Health Research TMH109787NCI NIH HHS K07 CA172294NCI NIH HHS K07CA172294NCI NIH HHS P30 CA016672NCI NIH HHS P30 CA068485NCI NIH HHS P30CA068485NCI NIH HHS P50CA070907NCI NIH HHS R01 CA092447NCI NIH HHS R01CA127219NIDA NIH HHS U01DA020830
6 · The paper itself

Abstract

We investigated genetic variation in CYP2A6 in relation to lung cancer risk among African American smokers, a high-risk population. Previously, we found that CYP2A6, a nicotine/nitrosamine metabolism gene, was associated with lung cancer risk in European Americans, but smoking habits, lung cancer risk and CYP2A6 gene variants differ significantly between European and African ancestry populations. Herein, African American ever-smokers, drawn from two independent lung cancer case-control studies, were genotyped for reduced activity CYP2A6 alleles and grouped by predicted metabolic activity. Lung cancer risk in the Southern Community Cohort Study (n = 494) was lower among CYP2A6 reduced versus normal metabolizers, as estimated by multivariate conditional logistic regression [odds ratio (OR) = 0.44; 95% confidence interval (CI) = 0.26-0.73] and by unconditional logistic regression (OR = 0.62; 95% CI = 0.41-0.94). The association was replicated in an independent study from MD Anderson Cancer Center (n = 407) (OR = 0.64; 95% CI = 0.42-0.98), and pooling the studies yielded an OR of 0.64 (95% CI = 0.48-0.86). Exploratory analyses revealed a significant interaction between CYP2A6 genotype and sex on the risk for lung cancer (Southern Community Cohort Study: P = 0.04; MD Anderson: P = 0.03; Pooled studies: P = 0.002) with a CYP2A6 effect in men only. These findings support a contribution of genetic variation in CYP2A6 to lung cancer risk among African American smokers, particularly men, whereby CYP2A6 genotypes associated with reduced metabolic activity confer a lower risk of developing lung cancer.

Indexed as

SmokingAdenocarcinomaBlack or African AmericanCarcinoma, Squamous CellCase-Control StudiesCytochrome P-450 CYP2A6FemaleFollow-Up StudiesGenotypeHumansLung NeoplasmsMaleMiddle AgedPolymorphism, GeneticPrognosisProspective StudiesCYP2A6 protein, humanCytochrome P-450 CYP2A6

Identifiers

PMID25416559
PMCPMC4291053
OpenAlexW2113976730

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.