Evidence map›Paper›PMID 25416442›Full record

ArticleTumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine2015

Epigenetic regulation of human hedgehog interacting protein in glioma cell lines and primary tumor samples.

Mehdi H Shahi, Idoya Zazpe, Mohammad Afzal, Subrata Sinha, Robert B Rebhun, Bárbara Meléndez, Juan A Rey, Javier S Castresana

Open access · greenAbstract read
In one paragraph

Article in Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Different Response ofFrontiers in oncology · 2018
    Article
  6. Article
  7. Low p21 level is necessary for the suppressive effects of micoRNA-31 on glioma cell migration and invasion.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Article
  8. Article
  9. The hedgehog antagonist HHIP as a favorable prognosticator in glioblastoma.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 3 countries.

Mehdi H ShahiBrain Tumor Biology Unit, University of Navarra School of Sciences, Pamplona, Spain.
Idoya Zazpe
Mohammad Afzal
Subrata Sinha
Robert B Rebhun
Bárbara Meléndez
Juan A Rey
Javier S Castresana
Universidad de Navarra · ESAligarh Muslim University · INHospital La Paz Institute for Health Research · ESHospital Virgen de la Salud · ESNational Brain Research Centre · INUniversity of California, Davis · US

Funding

The relationship between epidermal growth factor receptor and hedgehog signalingK01OD011111 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI REBHUN, ROBERT B · 2012 to 2015
$517k
NIH HHS K01 OD011111
6 · The paper itself

Abstract

Glioma constitutes one of the most common groups of brain tumors, and its prognosis is influenced by different genetic and epigenetic modulations. In this study, we demonstrated low or no expression of hedgehog interacting protein (HHIP) in most of the cell lines and primary glioma tumor samples. We further proceeded to promoter methylation study of this gene in the same cell lines and primary tumor samples and found 87 % (7/8) HHIP methylation in glioblastoma cell lines and 75 % (33/44) in primary tumor samples. These methylation pattern correlates with low or unexpressed HHIP in both cell lines and primary tumor samples. Our results suggest the possibility of epigenetic regulation of this gene in glioma, similarly to medulloblastoma, gastric, hepatic, and pancreatic cancers. Also, HHIP might be a diagnostic or prognostic marker in glioma and help to the detection of these tumors in early stages of disease.

Indexed as

AdultBrain NeoplasmsCarrier ProteinsCell Line, TumorDNA MethylationEpigenesis, GeneticGene Expression Regulation, NeoplasticGliomaHumansMembrane GlycoproteinsPromoter Regions, GeneticTranscription FactorsZinc Finger Protein GLI1Carrier ProteinsGLI1 protein, humanHHIP protein, humanMembrane GlycoproteinsTranscription FactorsZinc Finger Protein GLI1

Identifiers

PMID25416442
PMCPMC5012430
OpenAlexW2060579276

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.