Evidence map›Paper›PMID 25415339›Full record

ArticlePloS one2014

Genetic traits of Vibrio cholerae O1 Haitian isolates that are absent in contemporary strains from Kolkata, India.

Priyanka Ghosh, Arindam Naha, G P Pazhani, T Ramamurthy, Asish K Mukhopadhyay

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In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.6field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 34 citations in OpenAlex.

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  2. Genomic portrayal of emerging carbapenem-resistant El Tor variantAntimicrobial agents and chemotherapy · 2025
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  5. Outbreak of cholera in a remote village in western India.The Indian journal of medical research · 2022
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  10. Article
  11. Haitian VariantFrontiers in microbiology · 2019
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  12. Article
  13. Article
  14. Article
  15. Vibrio cholerae O1 Imported from Iraq to Kuwait, 2015.Emerging infectious diseases · 2016
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Priyanka GhoshDivision of Bacteriology, National Institute of Cholera, Enteric Diseases, Kolkata, India.
Arindam NahaDivision of Bacteriology, National Institute of Cholera, Enteric Diseases, Kolkata, India.
G P PazhaniDivision of Bacteriology, National Institute of Cholera, Enteric Diseases, Kolkata, India.
T RamamurthyDivision of Bacteriology, National Institute of Cholera, Enteric Diseases, Kolkata, India.
Asish K MukhopadhyayDivision of Bacteriology, National Institute of Cholera, Enteric Diseases, Kolkata, India.
National Institute of Cholera and Enteric Diseases · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The world's worst cholera epidemic in Haiti (2010) coerced to trace the origin and dissemination of the causative agent Vibrio cholerae O1 for proper management of cholera. Sequence analysis of the Haitian strain showed several variations in the genes encoding cholera toxin B subunit (ctxB); toxin-co-regulated pilus (tcpA), repeat in toxins (rtxA), quinolone resistance-determining region (QRDR) of gyrase A (gyrA), rstB of RS element along with the change in the number of repeat sequences at the promoter region of ctxAB. Our earlier studies showed that variant tcpA (tcpA CIRS) and ctxB (ctxB7) first appeared in Kolkata during 2003 and 2006, respectively. The present study revealed that a variant rtxA was first isolated in Kolkata during 2004 and probably formed the genetic background for the emergence of the ctxB7 allele as we were unable to detect a single strain with the combination of El Tor rtxA and ctxB7. The variant gyrA was first time detected in Kolkata during 1994. The Kolkata strains contained four heptad repeats (TTTTGAT) in their CT promoter regions whereas Haitian strains carried 5 heptad repeats. Haitian strains had 3 nucleotide deletions at the rstB gene, which is a unique feature of the classical biotype strains. But the Kolkata strains did not have such deletion mutations in the rstB. Our study demonstrated the existence of some Haitian genetic traits in Kolkata isolates along with the dissimilarities in genomic content with respect to rstB and ctxAB promoter region. Finally, we conclude that Haitian variant strain may be evolved due to sequential event in the Indian subcontinent strain with some cryptic modification in the genome.

Indexed as

Genetic VariationBacterial ProteinsBacterial ToxinsBase SequenceCholeraCholera ToxinDNA, BacterialEvolution, MolecularFimbriae ProteinsHaitiHumansIndiaMolecular Sequence DataMutationPolymerase Chain ReactionPromoter Regions, GeneticBacterial ProteinsBacterial ToxinsCholera ToxinDNA, BacterialFimbriae ProteinsRtxA protein, Vibrio choleraeTcpA protein, Vibrio cholerae

Identifiers

PMID25415339
PMCPMC4240540
OpenAlexW2030845955

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