Evidence map›Paper›PMID 25414591›Full record

ArticleNew journal of physics2014

Single particle tracking reveals spatial and dynamic organization of the

Alona Birjiniuk, Nicole Billings, Elizabeth Nance, Justin Hanes, Katharina Ribbeck, Patrick S Doyle

Abstract read
In one paragraph

Article in New journal of physics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Review
  2. Article
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  6. Review
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  17. Review
  18. Biofilms: an emergent form of bacterial life.Nature reviews. Microbiology · 2016
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Alona BirjiniukDepartment of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139.
Nicole BillingsDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139.
Elizabeth NanceCenter for Nanomedicine at the Wilmer Eye Institute, Johns Hopkins University, Baltimore, MD 21231.
Justin HanesCenter for Nanomedicine at the Wilmer Eye Institute, Johns Hopkins University, Baltimore, MD 21231.
Katharina RibbeckDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139.
Patrick S DoyleDepartment of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139.

Funding

TRAINING GRANTS IN ENVIROMENTAL TOXICOLOGYT32ES007020 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI ESSIGMANN, JOHN M · 1985 to 2024
$13.1M
Mucin Glycans in the Regulation of Microbial VirulenceR01EB017755 · NIBIB · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI RIBBECK, KATHARINA · 2013 to 2022
$3.6M
Elucidation of structure and dynamics of bacterial biofilms by particle trackingF30AI110053 · NIAID · HARVARD MEDICAL SCHOOL · PI BIRJINIUK, ALONA · 2014 to 2017
$175k
NIAID NIH HHS F30 AI110053NIBIB NIH HHS R01 EB017755NIEHS NIH HHS T32 ES007020
6 · The paper itself

Abstract

Biofilms are communities of surface-adherent bacteria surrounded by secreted polymers known as the extracellular polymeric substance (EPS). Biofilms are harmful in many industries, and thus it is of great interest to understand their mechanical properties and structure to determine ways to destabilize them. By performing single particle tracking with beads of varying surface functionalization it was found that charge interactions play a key role in mediating mobility within biofilms. With a combination of single particle tracking and microrheological concepts, it was found that

Identifiers

PMID25414591
PMCPMC4234077

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.