Evidence map›Paper›PMID 25414354›Full record

ArticleNucleic acids research2014

Ubiquitin recognition by FAAP20 expands the complex interface beyond the canonical UBZ domain.

Jessica L Wojtaszek, Su Wang, Hyungjin Kim, Qinglin Wu, Alan D D'Andrea, Pei Zhou

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.4field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Jessica L WojtaszekDepartment of Biochemistry, Duke University Medical Center, Durham, NC 27710, USA.
Su WangDepartment of Biochemistry, Duke University Medical Center, Durham, NC 27710, USA.
Hyungjin KimDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Qinglin WuDepartment of Biochemistry, Duke University Medical Center, Durham, NC 27710, USA.
Alan D D'AndreaDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Pei ZhouDepartment of Biochemistry, Duke University Medical Center, Durham, NC 27710, USA peizhou@biochem.duke.edu.
Dana-Farber Cancer Institute · USDuke University Hospital · USDuke Medical Center · US

Funding

Women's Cancer Research ProgramP30CA014236 · NCI · DUKE UNIVERSITY · PI DONNA NIEDZWIECKI · 1985 to 2026
$174.8M
Xenograft CoreP01HL048546 · NHLBI · OREGON HEALTH & SCIENCE UNIVERSITY · PI FLEMING, WILLIAM H · 1994 to 2020
$36.4M
STRUCTURE AND FUNCTION OF THE ERYTHROPOIETIN RECEPTORR01DK043889 · NIDDK · DANA-FARBER CANCER INSTITUTE · PI D'ANDREA, ALAN D. · 1992 to 2014
$5.3M
Molecular Pathogenesis of Fanconi AnemiaR37HL052725 · NHLBI · DANA-FARBER CANCER INSTITUTE · PI D'ANDREA, ALAN D. · 2004 to 2013
$3.9M
NCI NIH HHS P30 CA014236NHLBI NIH HHS 2P01HL048546NHLBI NIH HHS R37HL52725NIDDK NIH HHS R01DK43889PHS HHS NIGMS 51310
6 · The paper itself

Abstract

FAAP20 is an integral component of the Fanconi anemia core complex that mediates the repair of DNA interstrand crosslinks. The ubiquitin-binding capacity of the FAAP20 UBZ is required for recruitment of the Fanconi anemia complex to interstrand DNA crosslink sites and for interaction with the translesion synthesis machinery. Although the UBZ-ubiquitin interaction is thought to be exclusively encapsulated within the ββα module of UBZ, we show that the FAAP20-ubiquitin interaction extends beyond such a canonical zinc-finger motif. Instead, ubiquitin binding by FAAP20 is accompanied by transforming a disordered tail C-terminal to the UBZ of FAAP20 into a rigid, extended β-loop that latches onto the complex interface of the FAAP20 UBZ and ubiquitin, with the invariant C-terminal tryptophan emanating toward I44(Ub) for enhanced binding specificity and affinity. Substitution of the C-terminal tryptophan with alanine in FAAP20 not only abolishes FAAP20-ubiquitin binding in vitro, but also causes profound cellular hypersensitivity to DNA interstrand crosslink lesions in vivo, highlighting the indispensable role of the C-terminal tail of FAAP20, beyond the compact zinc finger module, toward ubiquitin recognition and Fanconi anemia complex-mediated DNA interstrand crosslink repair.

Indexed as

DNA RepairFanconi Anemia Complementation Group ProteinsModels, MolecularProtein BindingProtein Interaction Domains and MotifsTryptophanUbiquitinFAAP20 protein, humanFanconi Anemia Complementation Group ProteinsTryptophanUbiquitin

Identifiers

PMID25414354
PMCPMC4267625
OpenAlexW2132940708

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.