Evidence map›Paper›PMID 25412992›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2015

High-resolution genetic mapping and physical map construction for the fertility restorer Rfm1 locus in barley.

Hajime Ui, Mohammad Sameri, Mohammad Pourkheirandish, Men-Chi Chang, Hiroaki Shimada, Nils Stein, Takao Komatsuda, Hirokazu Handa

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

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14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Genome-wide analysis ofFrontiers in plant science · 2025
    Article
  2. Fertility restorer geneHorticulture research · 2024
    Article
  3. Article
  4. Development and application of KASP markers associated withPhysiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  5. Article
  6. Article
  7. Fine mapping of the male fertility restoration gene CaRf032 in Capsicum annuum L.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
  8. Transcriptomics, chromosome engineering and mapping identify a restorer-of-fertility region in the CMS wheat system msH1.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
  9. Undesired fertility restoration in msm1 barley associates with two mTERF genes.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
  10. High intraspecific diversity of Restorer-of-fertility-like genes in barley.The Plant journal : for cell and molecular biology · 2019
    Article
  11. Fine mapping of the restorer gene Rfp3 from an Iranian primitive rye (Secale cereale L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017
    Article
  12. Article
  13. Article
  14. Review
4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Hajime UiPlant Genome Research Unit, National Institute of Agrobiological Sciences, 2-1-2, Kan-non-dai, Tsukuba, 305-8602, Japan.
Mohammad Sameri
Mohammad Pourkheirandish
Men-Chi Chang
Hiroaki Shimada
Nils Stein
Takao Komatsuda
Hirokazu Handa

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageHigh-resolution genetic linkage mapping and BAC physical mapping narrowed the fertility restorer locus Rfm1 in barley to a sub-centimorgan genetic interval and a 208-kb physical interval. Rfm1 restores the fertility of msm1 and msm2 male-sterile cytoplasms in barley. The fertility restoration gene is located on the short arm of chromosome 6H (6HS), and we pursued a positional cloning of this gene. Starting from a previous result that has delimited Rfm1 within a 10.8 cM region on 6HS, we developed novel CAPS and SSR markers tightly linked to the gene in barley using the sequence information from the syntenic region of rice and barley genome assemblies. Next, we performed fine mapping of the Rfm1 locus. To isolate recombinants, we surveyed 3,638 F2 plants derived from a cross between the CMS strain and the Rf strain with adjacent markers (NAS2090 and NAS1080). This analysis identified 175 recombinant plants from the F2 population to build a high-resolution map with nine markers tightly linked to the Rfm1 locus. Rfm1 was located within the 0.14 cM region delimited by two markers (NAS9113 and NAS9200). Using these flanking markers as well as marker cosegregating with Rfm1 (NAS9133), we screened the BAC libraries of the cultivar Morex, an rfm1 carrier. We isolated 11 BAC clones and constructed a BAC physical map using their fingerprints. Finally, we delimited the Rfm1 locus encompassing the rfm1 allele on a 208-kb contig composed of three minimally overlapping BAC clones. This precise localization of the Rfm1 locus in the barley genome is expected to greatly accelerate the future map-based cloning of the Rfm1 gene by sequence analysis and its genetic transformation for the complementation of cytoplasmic male-sterile plants.

Indexed as

Genetic LinkagePhysical Chromosome MappingChromosomes, Artificial, BacterialChromosomes, PlantComparative Genomic HybridizationDNA, PlantFlowersGenes, PlantGenetic MarkersGenotypeHordeumPlant InfertilityDNA, PlantGenetic Markers

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.