Evidence map›Paper›PMID 25412208›Full record

ArticlePLoS genetics2014

HAM-5 functions as a MAP kinase scaffold during cell fusion in Neurospora crassa.

Wilfried Jonkers, Abigail C Leeder, Charles Ansong, Yuexi Wang, Feng Yang, Trevor L Starr, David G Camp, Richard D Smith, N Louise Glass

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
6.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 98 citations in OpenAlex.

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  14. Fungal evolution: cellular, genomic and metabolic complexity.Biological reviews of the Cambridge Philosophical Society · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Wilfried JonkersDepartment of Plant and Microbial Biology, University of California, Berkeley, Berkeley, California, United States of America.
Abigail C LeederDepartment of Plant and Microbial Biology, University of California, Berkeley, Berkeley, California, United States of America.
Charles AnsongPacific Northwest National Laboratory, Richland, Washington, United States of America.
Yuexi WangPacific Northwest National Laboratory, Richland, Washington, United States of America.
Feng YangPacific Northwest National Laboratory, Richland, Washington, United States of America.
Trevor L StarrEnergy Biosciences Institute, University of California, Berkeley, Berkeley, California, United States of America.
David G CampPacific Northwest National Laboratory, Richland, Washington, United States of America.
Richard D SmithPacific Northwest National Laboratory, Richland, Washington, United States of America.
N Louise GlassDepartment of Plant and Microbial Biology, University of California, Berkeley, Berkeley, California, United States of America; Energy Biosciences Institute, University of California, Berkeley, Berkeley, California, United States of America.
Pacific Northwest National Laboratory · USEnergy Biosciences Institute · USUniversity of California, Berkeley · US

Funding

Equipment Supplement Request for a Research Resource for Ultra-sensitive High Throughput ProteomicsP41GM103493 · NIGMS · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI SMITH, RICHARD D · 2012 to 2022
$22.6M
Tools for Functional Analysis and Cell BiologyP01GM068087 · NIGMS · DARTMOUTH COLLEGE · PI DUNLAP, JAY C. · 2004 to 2013
$19.3M
NIGMS NIH HHS P01 GM068087NIGMS NIH HHS P41 GM103493NIGMS NIH HHS P41 GM103493-11
6 · The paper itself

Abstract

Cell fusion in genetically identical Neurospora crassa germlings and in hyphae is a highly regulated process involving the activation of a conserved MAP kinase cascade that includes NRC-1, MEK-2 and MAK-2. During chemotrophic growth in germlings, the MAP kinase cascade members localize to conidial anastomosis tube (CAT) tips every ∼8 minutes, perfectly out of phase with another protein that is recruited to the tip: SOFT, a recently identified scaffold for the MAK-1 MAP kinase pathway in Sordaria macrospora. How the MAK-2 oscillation process is initiated, maintained and what proteins regulate the MAP kinase cascade is currently unclear. A global phosphoproteomics approach using an allele of mak-2 (mak-2Q100G) that can be specifically inhibited by the ATP analog 1NM-PP1 was utilized to identify MAK-2 kinase targets in germlings that were potentially involved in this process. One such putative target was HAM-5, a protein of unknown biochemical function. Previously, Δham-5 mutants were shown to be deficient for hyphal fusion. Here we show that HAM-5-GFP co-localized with NRC-1, MEK-2 and MAK-2 and oscillated with identical dynamics from the cytoplasm to CAT tips during chemotropic interactions. In the Δmak-2 strain, HAM-5-GFP localized to punctate complexes that did not oscillate, but still localized to the germling tip, suggesting that MAK-2 activity influences HAM-5 function/localization. However, MAK-2-GFP showed cytoplasmic and nuclear localization in a Δham-5 strain and did not localize to puncta. Via co-immunoprecipitation experiments, HAM-5 was shown to physically interact with NRC-1, MEK-2 and MAK-2, suggesting that it functions as a scaffold/transport hub for the MAP kinase cascade members for oscillation and chemotropic interactions during germling and hyphal fusion in N. crassa. The identification of HAM-5 as a scaffold-like protein will help to link the activation of MAK-2 cascade to upstream factors and proteins involved in this intriguing process of fungal communication.

Indexed as

Cell FusionFungal ProteinsHistidine KinaseHyphaeMAP Kinase Kinase 2MAP Kinase Signaling SystemMembrane ProteinsMitogen-Activated Protein KinasesNeurospora crassaProtein KinasesProtein Serine-Threonine KinasesSpores, FungalFungal ProteinsHistidine KinaseMAP Kinase Kinase 2Membrane ProteinsMitogen-Activated Protein Kinasesnrc-1 protein, Neurospora crassaProtein KinasesProtein Serine-Threonine Kinases

Identifiers

PMID25412208
PMCPMC4238974
OpenAlexW2056971571

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.