Evidence map›Paper›PMID 25412098›Full record

ArticlePLoS neglected tropical diseases2014

Identification of Ser/Thr kinase and forkhead associated domains in Mycobacterium ulcerans: characterization of novel association between protein kinase Q and MupFHA.

Gunjan Arora, Andaleeb Sajid, Anshika Singhal, Jayadev Joshi, Richa Virmani, Meetu Gupta, Nupur Verma, Abhijit Maji, Richa Misra, Grégory Baronian and 3 more

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. The Ser/Thr protein kinase PrkC imprints phenotypic memory inThe Journal of biological chemistry · 2019
    Article
  7. The Immune Escape Mechanisms ofInternational journal of molecular sciences · 2019
    Review
  8. GroEL Mediates Folding ofIndian journal of microbiology · 2018
    Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Gunjan AroraCSIR- Institute of Genomics and Integrative Biology, Delhi, India; Translational Health Science and Technology Institute, Gurgaon, India.
Andaleeb SajidCSIR- Institute of Genomics and Integrative Biology, Delhi, India.
Anshika SinghalCSIR- Institute of Genomics and Integrative Biology, Delhi, India.
Jayadev JoshiCSIR- Institute of Genomics and Integrative Biology, Delhi, India.
Richa VirmaniCSIR- Institute of Genomics and Integrative Biology, Delhi, India.
Meetu GuptaCSIR- Institute of Genomics and Integrative Biology, Delhi, India.
Nupur VermaCSIR- Institute of Genomics and Integrative Biology, Delhi, India.
Abhijit MajiCSIR- Institute of Genomics and Integrative Biology, Delhi, India.
Richa MisraCSIR- Institute of Genomics and Integrative Biology, Delhi, India.
Grégory BaronianLaboratoire de Dynamique des Interactions Membranaires Normales et Pathologiques, Universités de Montpellier II et I, CNRS, UMR 5235, Place Eugène Bataillon, Montpellier, France.
Amit K PandeyTranslational Health Science and Technology Institute, Gurgaon, India.
Virginie MolleLaboratoire de Dynamique des Interactions Membranaires Normales et Pathologiques, Universités de Montpellier II et I, CNRS, UMR 5235, Place Eugène Bataillon, Montpellier, France.
Yogendra SinghCSIR- Institute of Genomics and Integrative Biology, Delhi, India.
Institute of Genomics and Integrative Biology · INCouncil of Scientific and Industrial Research · INCentre National de la Recherche Scientifique · FRLaboratory of Pathogens and Host Immunity · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMycobacterium ulcerans, the causative agent of Buruli ulcer in humans, is unique among the members of Mycobacterium genus due to the presence of the virulence determinant megaplasmid pMUM001. This plasmid encodes multiple virulence-associated genes, including mup011, which is an uncharacterized Ser/Thr protein kinase (STPK) PknQ. METHODOLOGY/PRINCIPAL

findingsIn this study, we have characterized PknQ and explored its interaction with MupFHA (Mup018c), a FHA domain containing protein also encoded by pMUM001. MupFHA was found to interact with PknQ and suppress its autophosphorylation. Subsequent protein-protein docking and molecular dynamic simulation analyses showed that this interaction involves the FHA domain of MupFHA and PknQ activation loop residues Ser170 and Thr174. FHA domains are known to recognize phosphothreonine residues, and therefore, MupFHA may be acting as one of the few unusual FHA-domain having overlapping specificity. Additionally, we elucidated the PknQ-dependent regulation of MupDivIVA (Mup012c), which is a DivIVA domain containing protein encoded by pMUM001. MupDivIVA interacts with MupFHA and this interaction may also involve phospho-threonine/serine residues of MupDivIVA. CONCLUSIONS/SIGNIFICANCE: Together, these results describe novel signaling mechanisms in M. ulcerans and show a three-way regulation of PknQ, MupFHA, and MupDivIVA. FHA domains have been considered to be only pThr specific and our results indicate a novel mechanism of pSer as well as pThr interaction exhibited by MupFHA. These results signify the need of further re-evaluating the FHA domain -pThr/pSer interaction model. MupFHA may serve as the ideal candidate for structural studies on this unique class of modular enzymes.

Indexed as

Bacterial ProteinsComputational BiologyForkhead Transcription FactorsMolecular Dynamics SimulationMycobacterium ulceransProtein BindingProtein Serine-Threonine KinasesProtein Structure, TertiaryBacterial ProteinsForkhead Transcription FactorsProtein Serine-Threonine Kinases

Identifiers

PMID25412098
PMCPMC4238996
OpenAlexW2065353756

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.