Evidence map›Paper›PMID 25412082›Full record

ArticlePLoS genetics2014

An RNA-seq screen of the Drosophila antenna identifies a transporter necessary for ammonia detection.

Karen Menuz, Nikki K Larter, Joori Park, John R Carlson

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 92 papers.

0numbers the graph read from it
0cells of the map it votes in
92citing papers in PubMed
4.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

92 citing papers in PubMed, 146 citations in OpenAlex.

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  12. An integrated anatomical, functional and evolutionary view of thebioRxiv : the preprint server for biology · 2025
    Article
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  14. Expression ofInsects · 2024
    Article
  15. eLife · 2024
    Article
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32 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Karen MenuzDepartment of Molecular, Cellular and Developmental Biology, Yale University, New Haven, Connecticut, United States of America.
Nikki K LarterDepartment of Molecular, Cellular and Developmental Biology, Yale University, New Haven, Connecticut, United States of America; Interdepartmental Neuroscience Program, Yale University, New Haven, Connecticut, United States of America.
Joori ParkDepartment of Molecular, Cellular and Developmental Biology, Yale University, New Haven, Connecticut, United States of America.
John R CarlsonDepartment of Molecular, Cellular and Developmental Biology, Yale University, New Haven, Connecticut, United States of America.
Yale University · US

Funding

Skill Development for Diverse Scientific Careers: A New Course Predoctoral Program in Cellular and Molecular BiologyT32GM007223 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 1985 to 2019
$31.0M
ANALYSIS OF ODORANT RECEPTOR GENESR01DC004729 · NIDCD · YALE UNIVERSITY · PI John R Carlson · 2001 to 2026
$9.2M
GENETIC AND MOLECULAR ANALYSIS OF OLFACTIONR01DC002174 · NIDCD · YALE UNIVERSITY · PI CARLSON, JOHN R · 1994 to 2024
$8.0M
Analysis of a large family of taste receptorsR01DC011697 · NIDCD · YALE UNIVERSITY · PI John R Carlson · 2011 to 2026
$5.5M
Molecular basis of insect attraction to human odorantsF32DC011242 · NIDCD · YALE UNIVERSITY · PI MENUZ, KAREN ANNE · 2010 to 2012
$159k
NIDCD NIH HHS F32 DC011242NIDCD NIH HHS F32DC011242NIDCD NIH HHS R01 DC002174NIDCD NIH HHS R01 DC004729NIDCD NIH HHS R01 DC011697NIGMS NIH HHS T32 GM007223
6 · The paper itself

Abstract

Many insect vectors of disease detect their hosts through olfactory cues, and thus it is of great interest to understand better how odors are encoded. However, little is known about the molecular underpinnings that support the unique function of coeloconic sensilla, an ancient and conserved class of sensilla that detect amines and acids, including components of human odor that are cues for many insect vectors. Here, we generate antennal transcriptome databases both for wild type Drosophila and for a mutant that lacks coeloconic sensilla. We use these resources to identify genes whose expression is highly enriched in coeloconic sensilla, including many genes not previously implicated in olfaction. Among them, we identify an ammonium transporter gene that is essential for ammonia responses in a class of coeloconic olfactory receptor neurons (ORNs), but is not required for responses to other odorants. Surprisingly, the transporter is not expressed in ORNs, but rather in neighboring auxiliary cells. Thus, our data reveal an unexpected non-cell autonomous role for a component that is essential to the olfactory response to ammonia. The defective response observed in a Drosophila mutant of this gene is rescued by its Anopheles ortholog, and orthologs are found in virtually all insect species examined, suggesting that its role is conserved. Taken together, our results provide a quantitative analysis of gene expression in the primary olfactory organ of Drosophila, identify molecular components of an ancient class of olfactory sensilla, and reveal that auxiliary cells, and not simply ORNs, play an essential role in the coding of an odor that is a critical host cue for many insect vectors of human disease.

Indexed as

AmmoniaAnimalsCation Transport ProteinsDrosophilaDrosophila ProteinsGene Expression RegulationHigh-Throughput Nucleotide SequencingHumansInsect VectorsMutationOdorantsOlfactory Receptor NeuronsSensillaSmellTranscriptomeAmmoniaAmt protein, DrosophilaCation Transport ProteinsDrosophila Proteins

Identifiers

PMID25412082
PMCPMC4238959
OpenAlexW2036465646

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.