Evidence map›Paper›PMID 25407517›Full record

ArticleJournal of cutaneous pathology2015

A primary melanoma and its asynchronous metastasis highlight the role of BRAF, CDKN2A, and TERT.

Gregory A Hosler, Teresa Davoli, Ilgen Mender, Brandon Litzner, Jaehyuk Choi, Payal Kapur, Jerry W Shay, Richard C Wang

Open access · greenAbstract readCase Reports
In one paragraph

Article in Journal of cutaneous pathology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Therapeutic Targets in Telomerase and Telomere Biology of Cancers.Indian journal of clinical biochemistry : IJCB · 2020
    Review
  5. Article
  6. Article
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Gregory A HoslerDepartment of Dermatology, UT Southwestern Medical Center, Dallas, TX, USA; ProPath, Dallas, TX, USA; Department of Pathology, UT Southwestern Medical Center, Dallas, TX, USA.
Teresa Davoli
Ilgen Mender
Brandon Litzner
Jaehyuk Choi
Payal Kapur
Jerry W Shay
Richard C Wang
Southwestern Medical CenterThe University of Texas Southwestern Medical Center · USBrigham and Women's Hospital · USPropath Services (United States) · USYale University · US

Funding

UT Southwestern Medical Center Simmons Comprehensive Cancer CenterP30CA142543 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI Sandi Leigh Pruitt · 2010 to 2026
$53.7M
Elucidating the Role of Akt and Keratins in Autophagy and TumorigenesisK08CA164047 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI WANG, RICHARD C · 2012 to 2016
$708k
NCI NIH HHS 5P30CA142543NCI NIH HHS K08 CA164047NCI NIH HHS K08CA164047NCI NIH HHS P30 CA142543
6 · The paper itself

Abstract

backgroundAlterations in pathways including BRAF, CDKN2A, and TERT contribute to the development of melanoma, but the sequence in which the genetic alterations occur and their prognostic significance remains unclear. To clarify the role of these pathways, we analyzed a primary melanoma and its metastasis.

methodsImmunohistochemistry for BRAF-V600E, Sanger sequencing of BRAF and the TERT promoter, fluorescence in-situ hybridization, and telomere analyses were performed on a primary melanoma and its asynchronous cerebellar metastasis. Using the log-rank test and Cox-proportional model, the cancer genome atlas (TCGA) cohort of melanomas was analyzed for the effect of BRAF mutation and CDKN2A loss on survival.

resultsThe primary melanoma expressed mutant BRAF-V600E and possessed a homozygous deletion of CDKN2A. In addition to these early defects, the metastatic lesion also possessed evidence of aneuploidy and an activating mutation of the TERT promoter. In the TCGA melanoma cohort, there was a non-significant trend toward poor prognosis in early stage cutaneous melanoma patients with concomitant BRAF mutation and CDKN2A loss.

conclusionBRAF mutation and CDKN2A loss occurred early and TERT promoter mutation later in a case of lethal metastatic melanoma. The effects of these pathways on survival warrant further investigation in early stage cutaneous melanoma patients.

Indexed as

Genes, p16AdultBase SequenceCutaneous Malignant MelanomaFemaleFollow-Up StudiesHumansMelanomaMeningeal NeoplasmsMutationProto-Oncogene Proteins B-rafSkin NeoplasmsTelomeraseYoung AdultBRAF protein, humanProto-Oncogene Proteins B-rafTelomeraseTERT protein, humanBRAFCDKN2AFISHmelanomaTERT

Identifiers

PMID25407517
PMCPMC4470704
OpenAlexW1643480200

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.