Evidence map›Paper›PMID 25404520›Full record

ArticleThe Journal of infectious diseases2015

Prothymosin α variants isolated from CD8+ T cells and cervicovaginal fluid suppress HIV-1 replication through type I interferon induction.

Avelino Teixeira, Benjamin Yen, Gabriele Luca Gusella, Albert G Thomas, Michael P Mullen, Judith Aberg, Xintong Chen, Yujin Hoshida, Harm van Bakel, Eric Schadt and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. The CD8Microbiology and molecular biology reviews : MMBR · 2021
    Review
  4. Article
  5. Canonical Wnts Mediate CD8Journal of immunology (Baltimore, Md. : 1950) · 2020
    Article
  6. Article
  7. Article
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 2 countries.

Avelino TeixeiraDepartment of Medicine.
Benjamin YenDepartment of Microbiology.
Gabriele Luca GusellaDepartment of Medicine.
Albert G ThomasDepartment of Medicine.
Michael P MullenDepartment of Medicine.
Judith AbergDepartment of Medicine.
Xintong ChenDepartment of Medicine.
Yujin HoshidaDepartment of Medicine.
Harm van BakelDepartment of Genetics and Genomics Sciences Icahn Institute for Genomics and Multiscale Biology.
Eric SchadtDepartment of Genetics and Genomics Sciences Icahn Institute for Genomics and Multiscale Biology.
Christopher F BaslerDepartment of Microbiology.
Adolfo García-SastreDepartment of Medicine Department of Microbiology Global Health and Emerging Pathogens Institute, Icahn School of Medicine at Mount Sinai, New York, New York.
Arevik MosoianDepartment of Medicine.
Institut thématique Génétique, génomique et bioinformatique · FRIcahn School of Medicine at Mount Sinai · US

Funding

Molecular Virology and Systems Biology Screening CoreP01AI090935 · NIAID · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI KOENIG, RENATE · 2010 to 2014
$20.4M
Ebola VP35 Interferon-Antagonist: Mechanism and SignifR01AI059536 · NIAID · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI BASLER, CHRISTOPHER F · 2005 to 2015
$4.2M
Molecular Prognostic Indicators in Liver Cirrhosis and CancerR01DK099558 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI HOSHIDA, YUJIN · 2013 to 2016
$2.6M
Development of pan-filoviral inhibitors of replication targeting VP35 proteinsR56AI093786 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI BASLER, CHRISTOPHER F · 2011 to 2011
$761k
NIAID NIH HHS AI059536NIAID NIH HHS AI093786NIAID NIH HHS P01 AI090935NIAID NIH HHS R01 AI059536NIAID NIH HHS R56 AI093786NIDDK NIH HHS R01 DK099558PHS HHS PAI090935
6 · The paper itself

Abstract

Soluble factors from CD8(+) T cells and cervicovaginal mucosa of women are recognized as important in controlling human immunodeficiency virus type 1 (HIV-1) infection and transmission. Previously, we have shown the strong anti-HIV-1 activity of prothymosin α (ProTα) derived from CD8(+) T cells. ProTα is a small acidic protein with wide cell distribution, to which several functions have been ascribed, depending on its intracellular or extracellular localization. To date, activities of ProTα have been attributed to a single protein known as isoform 2. Here we report the isolation and identification of 2 new ProTα variants from CD8(+) T cells and cervicovaginal lavage with potent anti-HIV-1 activity. The first is a splice variant of the ProTα gene, known as isoform CRA_b, and the second is the product of a ProTα gene, thus far classified as a pseudogene 7. Native or recombinant ProTα variants potently restrict HIV-1 replication in macrophages through the induction of type I interferon. The baseline expression of interferon-responsive genes in primary human cervical tissues positively correlate with high levels of intracellular ProTα, and the knockdown of ProTα variants by small interfering RNA leads to downregulation of interferon target genes. Overall, these findings suggest that ProTα variants are innate immune mediators involved in immune surveillance.

Indexed as

Amino Acid SequenceAnti-HIV AgentsBody FluidsCD8-Positive T-LymphocytesCells, CulturedFemaleGene Expression RegulationHIV-1HumansInterferon-betaInterferon LambdaInterferonsInterferon Type IInterleukinsMacrophagesMolecular Sequence DataAnti-HIV AgentsInterferon-betaInterferon Lambdainterferon-lambda, humanInterferonsInterferon Type IInterleukinsProtein Precursorsprothymosin alphaThymosinCD8+ T cellscervicovaginal lavageHIV-1macrophagesprothymosin alpha

Identifiers

PMID25404520
PMCPMC4425839
OpenAlexW2113647798

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.