Evidence map›Paper›PMID 25404490›Full record

ArticlePlant cell reports2015

Functional characterization of a chalcone synthase from the liverwort Plagiochasma appendiculatum.

Hai-Na Yu, Lei Wang, Bin Sun, Shuai Gao, Ai-Xia Cheng, Hong-Xiang Lou

Abstract read
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In one paragraph

Article in Plant cell reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 50 citations in OpenAlex.

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  5. Characterization of the Key Bibenzyl Synthase inInternational journal of molecular sciences · 2022
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  13. Transcriptomic and functional analyses unveil the role of long non-coding RNAs in anthocyanin biosynthesis during sea buckthorn fruit ripening.DNA research : an international journal for rapid publication of reports on genes and genomes · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Hai-Na YuKey Laboratory of Chemical Biology of Natural Products, Ministry of Education School of Pharmaceutical Sciences, Shandong University, Jinan, 250012, China.
Lei Wang
Bin Sun
Shuai Gao
Ai-Xia Cheng
Hong-Xiang Lou
Shandong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageA chalcone synthase gene ( PaCHS ) was isolated and functionally characterized from liverwort. The ectopic expression of PaCHS in Marchantia paleacea callus raised the flavonoids content. Chalcone synthase (CHS; EC 2.3.1.74) is pivotal for the biosynthesis of flavonoid and anthocyanin pigments in plants. It produces naringenin chalcone by condensing one p-coumaroyl- and three malonyl-coenzyme A thioesters through a polyketide intermediate that is cyclized by intramolecular Claisen condensation. Although CHSs of higher plants have been extensively studied, enzyme properties of the CHSs in liverworts have been scarcely characterized. In this study, we report the cloning and characterization of CHS (designated as PaCHS) from the liverwort Plagiochasma appendiculatum. The gene product was 60-70 % identical with chalcone synthases from other species, and contained the characteristic conserved Cys-His-Asn catalytic triad. The recombinant PaCHS was able to catalyze p-coumaroyl-CoA and malonyl-CoA to generate naringenin in vitro. Heterologously expressed PaCHS protein showed similar kinetic properties to those of higher plant CHS. The ectopic expression of PaCHS in Marchantia paleacea callus raised the content of the total flavonoids. These results suggested that PaCHS played a key role in the flavonoids biosynthesis in liverworts. Furthermore, when the thallus of P. appendiculatum was treated with abiotic stress inducers methyl jasmonate, salicylic acid and abscisic acid, PaCHS expression was enhanced. This is the first time that a CHS in liverworts has been functionally characterized.

Indexed as

Models, MolecularAbscisic AcidAcetatesAcyltransferasesAmino Acid SequenceAnthocyaninsBiosynthetic PathwaysChalconesCyclopentanesFlavanonesFlavonoidsGene ExpressionHepatophytaMarchantiaMolecular Sequence DataOxylipinsAbscisic AcidAcetatesAcyltransferasesAnthocyaninsChalconesCyclopentanesFlavanonesflavanone synthetaseFlavonoidsmethyl jasmonatenaringeninnaringenin chalconeOxylipinsPlant Growth RegulatorsRecombinant ProteinsSalicylic Acid

Identifiers

PMID25404490
OpenAlexW2079137565

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.