Evidence map›Paper›PMID 25404302›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Synaptonemal complex extension from clustered telomeres mediates full-length chromosome pairing in Schmidtea mediterranea.

Youbin Xiang, Danny E Miller, Eric J Ross, Alejandro Sánchez Alvarado, R Scott Hawley

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. DNA damage and tissue repair: What we can learn from planaria.Seminars in cell & developmental biology · 2019
    Review
  10. Article
  11. Article
  12. Article
  13. PAR-TERRA directs homologous sex chromosome pairing.Nature structural & molecular biology · 2017
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. SmedGD 2.0: The Schmidtea mediterranea genome database.Genesis (New York, N.Y. : 2000) · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Youbin XiangStowers Institute for Medical Research, Kansas City, MO 64110;
Danny E MillerStowers Institute for Medical Research, Kansas City, MO 64110; Department of Molecular and Integrative Physiology, Kansas University Medical Center, Kansas City, KS 66160; and.
Eric J RossStowers Institute for Medical Research, Kansas City, MO 64110; Howard Hughes Medical Institute, Stowers Institute for Medical Research, Kansas City, MO 64110.
Alejandro Sánchez AlvaradoStowers Institute for Medical Research, Kansas City, MO 64110; Howard Hughes Medical Institute, Stowers Institute for Medical Research, Kansas City, MO 64110.
R Scott HawleyStowers Institute for Medical Research, Kansas City, MO 64110; Department of Molecular and Integrative Physiology, Kansas University Medical Center, Kansas City, KS 66160; and rsh@stowers.org.
Stowers Institute for Medical Research · USHoward Hughes Medical Institute · USUniversity of Kansas Medical Center · US

Funding

The molecular basis of planarian regenerationR37GM057260 · NIGMS · UNIVERSITY OF UTAH · PI SANCHEZ ALVARADO, ALEJANDRO · 2009 to 2018
$2.8M
Howard Hughes Medical InstituteNIGMS NIH HHS R37 GM057260
6 · The paper itself

Abstract

In the 1920s, József Gelei proposed that chromosome pairing in flatworms resulted from the formation of a telomere bouquet followed by the extension of synapsis from telomeres at the base of the bouquet, thus facilitating homolog pairing in a processive manner. A modern interpretation of Gelei's model postulates that the synaptonemal complex (SC) is nucleated close to the telomeres and then extends progressively along the full length of chromosome arms. We used the easily visible meiotic chromosomes, a well-characterized genome, and RNAi in the sexual biotype of the planarian Schmidtea mediterranea to test that hypothesis. By identifying and characterizing S. mediterranea homologs of genes encoding synaptonemal complex protein 1 (SYCP1), the topoisomerase-like protein SPO11, and RAD51, a key player in homologous recombination, we confirmed that SC formation begins near the telomeres and progresses along chromosome arms during zygotene. Although distal regions pair at the time of bouquet formation, pairing of a unique interstitial locus is not observed until the formation of full-length SC at pachytene. Moreover, neither full extension of the SC nor homologous pairing is dependent on the formation of double-strand breaks. These findings validate Gelei's speculation that full-length pairing of homologous chromosomes is mediated by the extension of the SC formed near the telomeres. S. mediterranea thus becomes the first organism described (to our knowledge) that forms a canonical telomere bouquet but does not require double-strand breaks for synapsis between homologous chromosomes. However, the initiation of SC formation at the base of the telomere bouquet, which then is followed by full-length homologous pairing in planarian spermatocytes, is not observed in other species and may not be conserved.

Indexed as

Amino Acid SequenceAnimalsChromosome PairingDNA Breaks, Double-StrandedEndodeoxyribonucleasesHelminth ProteinsIn Situ Hybridization, FluorescenceMaleMeiotic Prophase IMolecular Sequence DataNuclear ProteinsPachytene StagePlanariansRad51 RecombinaseRNA InterferenceSequence Homology, Amino AcidEndodeoxyribonucleasesHelminth ProteinsNuclear ProteinsRad51 Recombinasehomologous chromosome pairingmeiosisplanariansynaptonemal complextelomere bouquet

Identifiers

PMID25404302
PMCPMC4260563
OpenAlexW1997092361

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.