Evidence map›Paper›PMID 25403488›Full record

ArticleMolecular and cellular biology2015

MicroRNA 648 Targets ET-1 mRNA and is cotranscriptionally regulated with MICAL3 by PAX5.

Chen Li, Caryn S Gonsalves, Marthe-Sandrine Eiymo Mwa Mpollo, Punam Malik, Stanley M Tahara, Vijay K Kalra

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Chen LiDepartment of Biochemistry and Molecular Biology, Keck School of Medicine of University of Southern California, Los Angeles, California, USA.
Caryn S GonsalvesDepartment of Biochemistry and Molecular Biology, Keck School of Medicine of University of Southern California, Los Angeles, California, USA.
Marthe-Sandrine Eiymo Mwa MpolloDivision of Experimental Hematology and Cancer Biology, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, USA.
Punam MalikDivision of Experimental Hematology and Cancer Biology, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, USA.
Stanley M TaharaDepartment of Molecular Microbiology and Immunology, Keck School of Medicine of University of Southern California, Los Angeles, California, USA.
Vijay K KalraDepartment of Biochemistry and Molecular Biology, Keck School of Medicine of University of Southern California, Los Angeles, California, USA vkalra@usc.edu.
University of Southern California · USCincinnati Children's Hospital Medical Center · US

Funding

USC RESEARCH CENTER FOR LIVER DISEASES: PILOT PROGRAMSP30DK048522 · NIDDK · UNIVERSITY OF SOUTHERN CALIFORNIA · PI KAPLOWITZ, NEIL · 1995 to 2020
$21.8M
PlGF-HIF1a-miRNA Axis in Sickle Pulmonary HypertensionR01HL111372 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI KALRA, VIJAY K., MALIK, PUNAM · 2012 to 2016
$3.1M
NHLBI NIH HHS R01 HL111372NHLBI NIH HHS R01-HL111372NIDDK NIH HHS P30 DK048522NIDDK NIH HHS P30-DK048522
6 · The paper itself

Abstract

Pulmonary hypertension (PHT) is associated with high mortality in sickle cell anemia (SCA). Previously, we showed that elevated levels of placenta growth factor (PlGF) in SCA patients correlate with increased levels of the potent vasoconstrictor endothelin-1 (ET-1) and PHT. Moreover, PlGF induced the expression of ET-1 via hypoxia-inducible factor 1α. Here, we show a novel example of ET-1 posttranscriptional regulation by PlGF via action of microRNA 648 (miR-648), which is subject to transcriptional coregulation with its host gene, MICAL3 (microtubule-associated monooxygenase, calponin, and LIM domain containing 3gene). PlGF repressed expression of miR-648 in endothelial cells. Luciferase reporter assays using wild-type and mutant ET-1 3' untranslated region (UTR) constructs, and transfection of miR-648 mimics showed that miR-648 targets the 3' UTR of ET-1 mRNA. Since miR-648 is located in a 5'-proximal intron of MICAL3, we examined which of three potential promoters was responsible for its expression. The MICAL3 distal promoter (P1) was the predominant promoter used for transcription of pre-miR-648, and it was under positive control by PAX5 (paired box protein 5) transcription factor, as demonstrated by the loss and gain of function of PAX5 activity, and chromatin immunoprecipitation analysis. These studies provide a novel link wherein PlGF-mediated downregulation of PAX5 attenuates miR-648 expression leading to increased ET-1 levels that are known to induce PHT in SCA.

Indexed as

Anemia, Sickle CellCells, CulturedEndothelial CellsEndothelin-1Gene Expression RegulationHumansMicroRNAsMixed Function OxygenasesPAX5 Transcription FactorRNA, MessengerTranscription FactorsEndothelin-1MICAL3 protein, humanMicroRNAsMIRN-648 microRNA, humanMixed Function OxygenasesPAX5 protein, humanPAX5 Transcription FactorRNA, MessengerTranscription Factors

Identifiers

PMID25403488
PMCPMC4285416
OpenAlexW1977801036

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.