Evidence map›Paper›PMID 25402770›Full record

ArticleNature chemical biology2015

Secondary structure reshuffling modulates glycosyltransferase function at the membrane.

David Giganti, David Albesa-Jové, Saioa Urresti, Ane Rodrigo-Unzueta, Mariano A Martínez, Natalia Comino, Nathalie Barilone, Marco Bellinzoni, Alexandre Chenal, Marcelo E Guerin and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature chemical biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Functional and mechanistic characterization of the phosphatidyl-Frontiers in cellular and infection microbiology · 2026
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  3. Mapping the energy landscape of a fold-switching protein MAD2.Protein science : a publication of the Protein Society · 2025
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  4. Article
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  6. Cryo-EM analysis ofScience advances · 2024
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  7. Article
  8. Fluid protein fold space and its implications.BioEssays : news and reviews in molecular, cellular and developmental biology · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. AlphaFold2 fails to predict protein fold switching.Protein science : a publication of the Protein Society · 2022
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Predictable fold switching by the SARS-CoV-2 protein ORF9b.Protein science : a publication of the Protein Society · 2021
    Article
  18. ProteinMolecules (Basel, Switzerland) · 2021
    Article
  19. The Phosphatidyl-Journal of bacteriology · 2021
    Article
  20. Functional and Regulatory Roles of Fold-Switching Proteins.Structure (London, England : 1993) · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

David Giganti1] Institut Pasteur, Unité de Microbiologie Structurale, CNRS UMR 3528, Paris, France. [2] Unidad de Biofisica, Centro Mixto Consejo Superior de Investigaciones Cientificas-Universidad del País Vasco/Euskal Herriko Unibertsitatea (CSIC,UPV/EHU), Leioa, Bizkaia, Spain. [3] Departamento de Bioquímica, Universidad del País Vasco, Spain.
David Albesa-Jové1] Unidad de Biofisica, Centro Mixto Consejo Superior de Investigaciones Cientificas-Universidad del País Vasco/Euskal Herriko Unibertsitatea (CSIC,UPV/EHU), Leioa, Bizkaia, Spain. [2] Departamento de Bioquímica, Universidad del País Vasco, Spain.
Saioa Urresti1] Unidad de Biofisica, Centro Mixto Consejo Superior de Investigaciones Cientificas-Universidad del País Vasco/Euskal Herriko Unibertsitatea (CSIC,UPV/EHU), Leioa, Bizkaia, Spain. [2] Departamento de Bioquímica, Universidad del País Vasco, Spain.
Ane Rodrigo-Unzueta1] Unidad de Biofisica, Centro Mixto Consejo Superior de Investigaciones Cientificas-Universidad del País Vasco/Euskal Herriko Unibertsitatea (CSIC,UPV/EHU), Leioa, Bizkaia, Spain. [2] Departamento de Bioquímica, Universidad del País Vasco, Spain.
Mariano A MartínezInstitut Pasteur, Unité de Microbiologie Structurale, CNRS UMR 3528, Paris, France.
Natalia Comino1] Unidad de Biofisica, Centro Mixto Consejo Superior de Investigaciones Cientificas-Universidad del País Vasco/Euskal Herriko Unibertsitatea (CSIC,UPV/EHU), Leioa, Bizkaia, Spain. [2] Departamento de Bioquímica, Universidad del País Vasco, Spain.
Nathalie BariloneInstitut Pasteur, Unité de Microbiologie Structurale, CNRS UMR 3528, Paris, France.
Marco BellinzoniInstitut Pasteur, Unité de Microbiologie Structurale, CNRS UMR 3528, Paris, France.
Alexandre ChenalInstitut Pasteur, Unité de Biochimie des Interactions Macromoléculaires, CNRS UMR 3528, Paris, France.ORCID 0000000249591003
Marcelo E Guerin1] Unidad de Biofisica, Centro Mixto Consejo Superior de Investigaciones Cientificas-Universidad del País Vasco/Euskal Herriko Unibertsitatea (CSIC,UPV/EHU), Leioa, Bizkaia, Spain. [2] Departamento de Bioquímica, Universidad del País Vasco, Spain. [3] IKERBASQUE, Basque Foundation for Science, Bilbao, Spain.
Pedro M AlzariInstitut Pasteur, Unité de Microbiologie Structurale, CNRS UMR 3528, Paris, France.
Centre National de la Recherche Scientifique · FRConsejo Superior de Investigaciones Científicas · ESUniversity of the Basque Country · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Secondary structure refolding is a key event in biology as it modulates the conformation of many proteins in the cell, generating functional or aberrant states. The crystal structures of mannosyltransferase PimA reveal an exceptional flexibility of the protein along the catalytic cycle, including β-strand-to-α-helix and α-helix-to-β-strand transitions. These structural changes modulate catalysis and are promoted by interactions of the protein with anionic phospholipids in the membrane.

Indexed as

Protein Structure, SecondaryAnimalsBacterial ProteinsCell MembraneCrystallography, X-RayGlycosyltransferasesHumansMannosyltransferasesModels, MolecularMutagenesis, Site-DirectedPhospholipidsBacterial ProteinsGlycosyltransferasesMannosyltransferasesphosphatidyl-myo-inositol mannosyltransferase PimA, Mycobacterium smegmatisPhospholipids

Identifiers

PMID25402770
OpenAlexW2063601527

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.