Evidence map›Paper›PMID 25402633›Full record

ArticleOncotarget2015

RNA interference screening identifies a novel role for PCTK1/CDK16 in medulloblastoma with c-Myc amplification.

Paulina Ćwiek, Zaira Leni, Fabiana Salm, Valeriya Dimitrova, Beata Styp-Rekowska, Gianpaolo Chiriano, Michael Carroll, Katrin Höland, Valentin Djonov, Leonardo Scapozza and 2 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Medulloblastoma genomics in the modern molecular era.Brain pathology (Zurich, Switzerland) · 2020
    Review
  6. Article
  7. Article
  8. Phospholipase Cβ1 regulates proliferation of neuronal cells.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2018
    Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Paulina ĆwiekDivision of Pediatric Hematology/Oncology, Bern University Hospital, Bern, Switzerland.
Zaira LeniDivision of Pediatric Hematology/Oncology, Bern University Hospital, Bern, Switzerland.
Fabiana SalmDivision of Pediatric Hematology/Oncology, Bern University Hospital, Bern, Switzerland.
Valeriya DimitrovaDivision of Pediatric Hematology/Oncology, Bern University Hospital, Bern, Switzerland.
Beata Styp-RekowskaInstitute of Anatomy, University of Bern, Bern, Switzerland.
Gianpaolo ChirianoPharmaceutical Biochemistry, School of Pharmaceutical Sciences, University of Geneva, University of Lausanne, Geneva, Switzerland.
Michael CarrollCentre for Synthesis and Chemical Biology, University College Dublin, Belfield, Dublin, Ireland.
Katrin HölandDivision of Pediatric Hematology/Oncology, Bern University Hospital, Bern, Switzerland.
Valentin DjonovInstitute of Anatomy, University of Bern, Bern, Switzerland.
Leonardo ScapozzaPharmaceutical Biochemistry, School of Pharmaceutical Sciences, University of Geneva, University of Lausanne, Geneva, Switzerland.
Patrick GuiryCentre for Synthesis and Chemical Biology, University College Dublin, Belfield, Dublin, Ireland.
Alexandre ArcaroDivision of Pediatric Hematology/Oncology, Bern University Hospital, Bern, Switzerland.
University Hospital of Bern · CHUniversity College Dublin · IEUniversity of Bern · CHUniversity of Geneva · CHUniversity of Lausanne · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Medulloblastoma (MB) is the most common malignant brain tumor in children and is associated with a poor outcome. cMYC amplification characterizes a subgroup of MB with very poor prognosis. However, there exist so far no targeted therapies for the subgroup of MB with cMYC amplification. Here we used kinome-wide RNA interference screening to identify novel kinases that may be targeted to inhibit the proliferation of c-Myc-overexpressing MB. The RNAi screen identified a set of 5 genes that could be targeted to selectively impair the proliferation of c-Myc-overexpressing MB cell lines: AKAP12 (A-kinase anchor protein), CSNK1α1 (casein kinase 1, alpha 1), EPHA7 (EPH receptor A7) and PCTK1 (PCTAIRE protein kinase 1). When using RNAi and a pharmacological inhibitor selective for PCTK1, we could show that this kinase plays a crucial role in the proliferation of MB cell lines and the activation of the mammalian target of rapamycin (mTOR) pathway. In addition, pharmacological PCTK1 inhibition reduced the expression levels of c-Myc. Finally, targeting PCTK1 selectively impaired the tumor growth of c-Myc-overexpressing MB cells in vivo. Together our data uncover a novel and crucial role for PCTK1 in the proliferation and survival of MB characterized by cMYC amplification.

Indexed as

Gene Expression Regulation, NeoplasticRNA InterferenceAnimalsCell CycleCell ProliferationCerebellar NeoplasmsChick EmbryoChorioallantoic MembraneCyclin-Dependent KinasesHumansMedulloblastomaOligonucleotide Array Sequence AnalysisProto-Oncogene Proteins c-mycRNA, Small InterferingCyclin-Dependent KinasesPCTAIRE-1 protein kinaseProto-Oncogene Proteins c-mycRNA, Small Interfering

Identifiers

PMID25402633
PMCPMC4381582
OpenAlexW1532042963

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.