Evidence map›Paper›PMID 25402211›Full record

ArticlePloS one2014

C/EBP transcription factors in human squamous cell carcinoma: selective changes in expression of isoforms correlate with the neoplastic state.

Sanjay Anand, John Ebner, Christine B Warren, Manu S Raam, Melissa Piliang, Steven D Billings, Edward V Maytin

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sanjay AnandDepartment of Dermatology, Cleveland Clinic, Cleveland, Ohio, United States of America; Department of Biomedical Engineering, Cleveland Clinic, Cleveland, Ohio, United States of America.
John EbnerDepartment of Dermatology, Cleveland Clinic, Cleveland, Ohio, United States of America.
Christine B WarrenDepartment of Dermatology, Cleveland Clinic, Cleveland, Ohio, United States of America.
Manu S RaamDepartment of Biomedical Engineering, Cleveland Clinic, Cleveland, Ohio, United States of America.
Melissa PiliangDepartment of Dermatology, Cleveland Clinic, Cleveland, Ohio, United States of America; Department of Anatomic Pathology, Cleveland Clinic, Cleveland, Ohio, United States of America.
Steven D BillingsDepartment of Dermatology, Cleveland Clinic, Cleveland, Ohio, United States of America; Department of Anatomic Pathology, Cleveland Clinic, Cleveland, Ohio, United States of America.
Edward V MaytinDepartment of Dermatology, Cleveland Clinic, Cleveland, Ohio, United States of America; Department of Biomedical Engineering, Cleveland Clinic, Cleveland, Ohio, United States of America; Wellman Center for Photomedicine, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, United States of America.
Cleveland Clinic · USHarvard University · US

Funding

Small Molecule Enhancers of Photodynamic Therapy for Skin CancerP01CA084203 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI Brian William Pogue · 2001 to 2026
$27.9M
NCI NIH HHS P01 CA084203NCI NIH HHS P01-CA84203
6 · The paper itself

Abstract

The CCAAT/Enhancer Binding Proteins (C/EBPs) are a family of leucine-zipper transcription factors that regulate physiological processes such as energy metabolism, inflammation, cell cycle, and the development and differentiation of several tissues including skin. Recently, a role for C/EBPs in tumor cell proliferation and differentiation has been proposed, but the incomplete characterization in the literature of multiple translational isoforms of these proteins has made interpretation of these roles difficult. Therefore, we have carefully reexamined C/EBP isoform expression in human non-melanoma skin cancers. C/EBPα, C/EBPβ, and C/EBPδ were analyzed histologically in squamous cell carcinomas (SCC). The individual isoforms of C/EBPα and C/EBPβ were examined by immunofluorescent digital imaging, western blotting and DNA binding activity (electrophoretic mobility shift analysis). Expression of all C/EBP family proteins was decreased in SCC tumors. Suppression was greatest for C/EBPα, less for C/EBPβ, and least for C/EBPδ. Western analyses confirmed that C/EBPα p42 and p30 isoforms were decreased. For C/EBPβ, only the abundant full-length isoform (C/EBPβ-1, LAP*, 55 kD) was reduced, whereas the smaller isoforms, C/EBPβ-2 (LAP, 48 kD) and C/EBPβ-3 (LIP, 20 kD), which are predominantly nuclear, were significantly increased in well- and moderately-differentiated SCC (up to 14-fold for C/EBPβ-3). These elevations correlated with increases in PCNA, a marker of proliferation. Although C/EBPβ displayed increased post-translational modifications in SCC, phosphorylation of C/EBPβ-1 (Thr 235) was not altered. C/EBP-specific DNA binding activity in nuclear and whole-cell extracts of cultured cells and tumors was predominantly attributable to C/EBPβ. In summary, two short C/EBPβ isoforms, C/EBPβ-2 and C/EBPβ-3, represent strong candidate markers for epithelial skin malignancy, due to their preferential expression in carcinoma versus normal skin, and their strong correlation with tumor proliferation.

Indexed as

Gene Expression Regulation, NeoplasticAlternative SplicingBiopsyCarcinoma, Squamous CellCCAAT-Enhancer-Binding Protein-alphaCCAAT-Enhancer-Binding Protein-betaCCAAT-Enhancer-Binding Protein-deltaCCAAT-Enhancer-Binding ProteinsCell Line, TumorHumansNeoplasm StagingPhosphorylationRNA IsoformsSkin NeoplasmsCCAAT-Enhancer-Binding Protein-alphaCCAAT-Enhancer-Binding Protein-betaCCAAT-Enhancer-Binding Protein-deltaCCAAT-Enhancer-Binding ProteinsRNA Isoforms

Identifiers

PMID25402211
PMCPMC4234316
OpenAlexW2093936625

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.