Evidence map›Paper›PMID 25401760›Full record

ArticlePloS one2014

RNase MRP cleaves pre-tRNASer-Met in the tRNA maturation pathway.

Yuichiro Saito, Jun Takeda, Kousuke Adachi, Yuko Nobe, Junya Kobayashi, Kouji Hirota, Douglas V Oliveira, Masato Taoka, Toshiaki Isobe

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. The many faces of RNA-based RNase P, an RNA-world relic.Trends in biochemical sciences · 2021
    Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Yuichiro SaitoDepartment of Chemistry, Graduate School of Science and Engineering, Tokyo Metropolitan University, Tokyo, Japan.
Jun TakedaCore Research for Evolutional Science and Technology (CREST), Japan Science and Technology Agency, Tokyo, Japan.
Kousuke AdachiDepartment of Chemistry, Graduate School of Science and Engineering, Tokyo Metropolitan University, Tokyo, Japan.
Yuko NobeCore Research for Evolutional Science and Technology (CREST), Japan Science and Technology Agency, Tokyo, Japan.
Junya KobayashiDivision of Genome Repair Dynamics, Radiation Biology Center, Kyoto University, Kyoto, Japan.
Kouji HirotaDepartment of Chemistry, Graduate School of Science and Engineering, Tokyo Metropolitan University, Tokyo, Japan.
Douglas V OliveiraDivision of Genome Repair Dynamics, Radiation Biology Center, Kyoto University, Kyoto, Japan.
Masato TaokaDepartment of Chemistry, Graduate School of Science and Engineering, Tokyo Metropolitan University, Tokyo, Japan; Core Research for Evolutional Science and Technology (CREST), Japan Science and Technology Agency, Tokyo, Japan.
Toshiaki IsobeDepartment of Chemistry, Graduate School of Science and Engineering, Tokyo Metropolitan University, Tokyo, Japan; Core Research for Evolutional Science and Technology (CREST), Japan Science and Technology Agency, Tokyo, Japan.
Tokyo Metropolitan University · JPJapan Science and Technology Agency · JPKyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ribonuclease mitochondrial RNA processing (RNase MRP) is a multifunctional ribonucleoprotein (RNP) complex that is involved in the maturation of various types of RNA including ribosomal RNA. RNase MRP consists of a potential catalytic RNA and several protein components, all of which are required for cell viability. We show here that the temperature-sensitive mutant of rmp1, the gene for a unique protein component of RNase MRP, accumulates the dimeric tRNA precursor, pre-tRNA(Ser-Met). To examine whether RNase MRP mediates tRNA maturation, we purified the RNase MRP holoenzyme from the fission yeast Schizosaccharomyces pombe and found that the enzyme directly and selectively cleaves pre-tRNA(Ser-Met), suggesting that RNase MRP participates in the maturation of specific tRNA in vivo. In addition, mass spectrometry-based ribonucleoproteomic analysis demonstrated that this RNase MRP consists of one RNA molecule and 11 protein components, including a previously unknown component Rpl701. Notably, limited nucleolysis of RNase MRP generated an active catalytic core consisting of partial mrp1 RNA fragments, which constitute "Domain 1" in the secondary structure of RNase MRP, and 8 proteins. Thus, the present study provides new insight into the structure and function of RNase MRP.

Indexed as

Amino Acid SequenceAmino Acid SubstitutionBase SequenceCatalysisEndoribonucleasesEnzyme ActivationMutationNucleic Acid ConformationRNA PrecursorsRNA, Transfer, SerSchizosaccharomycesEndoribonucleasesmitochondrial RNA-processing endoribonucleaseRNA PrecursorsRNA, Transfer, Ser

Identifiers

PMID25401760
PMCPMC4234475
OpenAlexW2053220209

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.