Evidence map›Paper›PMID 25401506›Full record

ArticlePloS one2014

A disordered region in the EvpP protein from the type VI secretion system of Edwardsiella tarda is essential for EvpC binding.

Wentao Hu, Ganesh Anand, J Sivaraman, Ka Yin Leung, Yu-Keung Mok

Abstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Roles of EvpP inFrontiers in cellular and infection microbiology · 2020
    Article
  6. An Overview of Anti-Eukaryotic T6SS Effectors.Frontiers in cellular and infection microbiology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Wentao HuDepartment of Biological Sciences, 14 Science Drive 4, National University of Singapore, Singapore, Singapore 117543.
Ganesh AnandDepartment of Biological Sciences, 14 Science Drive 4, National University of Singapore, Singapore, Singapore 117543.
J SivaramanDepartment of Biological Sciences, 14 Science Drive 4, National University of Singapore, Singapore, Singapore 117543.
Ka Yin LeungDepartment of Biology, Faculty of Natural and Applied Sciences, Trinity Western University, Langley, British Columbia, Canada V2Y 1Y1; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai, China 200237.
Yu-Keung MokDepartment of Biological Sciences, 14 Science Drive 4, National University of Singapore, Singapore, Singapore 117543.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The type VI secretion system (T6SS) of pathogenic bacteria plays important roles in both virulence and inter-bacterial competitions. The effectors of T6SS are presumed to be transported either by attaching to the tip protein or by interacting with HcpI (haemolysin corregulated protein 1). In Edwardsiella tarda PPD130/91, the T6SS secreted protein EvpP (E. tarda virulent protein P) is found to be essential for virulence and directly interacts with EvpC (Hcp-like), suggesting that it could be a potential effector. Using limited protease digestion, nuclear magnetic resonance heteronuclear Nuclear Overhauser Effects, and hydrogen-deuterium exchange mass spectrometry, we confirmed that the dimeric EvpP (40 kDa) contains a substantial proportion (40%) of disordered regions but still maintains an ordered and folded core domain. We show that an N-terminal, 10-kDa, protease-resistant fragment in EvpP connects to a shorter, 4-kDa protease-resistant fragment through a highly flexible region, which is followed by another disordered region at the C-terminus. Within this C-terminal disordered region, residues Pro143 to Ile168 are essential for its interaction with EvpC. Unlike the highly unfolded T3SS effector, which has a lower molecular weight and is maintained in an unfolded conformation with a dedicated chaperone, the T6SS effector seems to be relatively larger, folded but partially disordered and uses HcpI as a chaperone.

Indexed as

Bacterial Secretion SystemsAmino Acid SequenceBacterial ProteinsEdwardsiella tardaMolecular Sequence DataMutationNuclear Magnetic Resonance, BiomolecularProtein BindingProtein MultimerizationRecombinant Fusion ProteinsSolutionsVirulenceBacterial ProteinsBacterial Secretion SystemsRecombinant Fusion ProteinsSolutions

Identifiers

PMID25401506
PMCPMC4234509

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.