Evidence map›Paper›PMID 25400524›Full record

ArticleJournal of chemical theory and computation2014

Rapid Computational Prediction of Thermostabilizing Mutations for G Protein-Coupled Receptors.

Supriyo Bhattacharya, Sangbae Lee, Reinhard Grisshammer, Christopher G Tate, Nagarajan Vaidehi

Open access · greenAbstract read
In one paragraph

Article in Journal of chemical theory and computation, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 32 citations in OpenAlex.

  1. One-shot design elevates functional expression levels of a voltage-gated potassium channel.Protein science : a publication of the Protein Society · 2024
    Article
  2. Article
  3. Review
  4. An online GPCR structure analysis platform.Nature structural & molecular biology · 2021
    Article
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  6. Article
  7. Review
  8. Article
  9. Article
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  13. How Can Mutations Thermostabilize G-Protein-Coupled Receptors?Trends in pharmacological sciences · 2016
    Review
  14. Article
  15. Article
  16. Review
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Supriyo BhattacharyaDivision of Immunology, Beckman Research Institute of the City of Hope , 1500 East Duarte Rd, Duarte, California 91010, United States.
Sangbae LeeDivision of Immunology, Beckman Research Institute of the City of Hope , 1500 East Duarte Rd, Duarte, California 91010, United States.
Reinhard GrisshammerMembrane Protein Structure Function Unit, National Institute of Neurological Disorders and Stroke, National Institutes of Health , Department of Health and Human Services, Rockville, Maryland 20852, United States.
Christopher G TateMRC Laboratory of Molecular Biology, Cambridge Biomedical Campus , Francis Crick Avenue, Cambridge CB2 0QH, United Kingdom.
Nagarajan VaidehiDivision of Immunology, Beckman Research Institute of the City of Hope , 1500 East Duarte Rd, Duarte, California 91010, United States.
City of Hope · USBeckman Research InstituteMRC Laboratory of Molecular Biology · GBNational Institutes of Health · US

Funding

Structure of integral membrane proteinsZIANS003016 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI GRISSHAMMER, REINHARD · 2009 to 2017
$8.5M
Computationally Guided Design of Thermostable mutants of Neurotensin receptor1R01GM097261 · NIGMS · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI VAIDEHI, NAGARAJAN · 2011 to 2018
$2.3M
Medical Research Council MC_U105197215NIGMS NIH HHS R01 GM097261
6 · The paper itself

Abstract

G protein-coupled receptors (GPCRs) are highly dynamic and often denature when extracted in detergents. Deriving thermostable mutants has been a successful strategy to stabilize GPCRs in detergents, but this process is experimentally tedious. We have developed a computational method to predict the position of the thermostabilizing mutations for a given GPCR sequence. We have validated the method against experimentally measured thermostability data for single mutants of the β

Identifiers

PMID25400524
PMCPMC4230369
OpenAlexW2322051234

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.