ArticleNucleic acids research2015
GenoBase: comprehensive resource database of Escherichia coli K-12.
Article in Nucleic acids research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
24 citing papers in PubMed, 40 citations in OpenAlex.
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- The continuing evolution of barcode applications: Functional toxicology to cell lineage.Experimental biology and medicine (Maywood, N.J.) · 2022Review
- Past, Present, and Future of Genome Modification inMicroorganisms · 2022Review
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- Missing Links Between Gene Function and Physiology in Genomics.Frontiers in physiology · 2022Article
- Structural polymorphism and substrate promiscuity of a ribosome-associated molecular chaperone.Magnetic resonance (Gottingen, Germany) · 2021Article
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- Temporal order and precision of complex stress responses in individual bacteria.Molecular systems biology · 2019Article
- Genomewide phenotypic analysis of growth, cell morphogenesis, and cell cycle events inMolecular systems biology · 2018Article
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- Phenotype inference in aneLife · 2017Article
- A New Natural Product Analog of Blasticidin S Reveals Cellular Uptake Facilitated by the NorA Multidrug Transporter.Antimicrobial agents and chemotherapy · 2017Article
- Accumulation of heme biosynthetic intermediates contributes to the antibacterial action of the metalloid tellurite.Nature communications · 2017Article
Corrections and comments
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Authors and funding
22 authors at 10 institutions in 2 countries.
Funding
Abstract
Comprehensive experimental resources, such as ORFeome clone libraries and deletion mutant collections, are fundamental tools for elucidation of gene function. Data sets by omics analysis using these resources provide key information for functional analysis, modeling and simulation both in individual and systematic approaches. With the long-term goal of complete understanding of a cell, we have over the past decade created a variety of clone and mutant sets for functional genomics studies of Escherichia coli K-12. We have made these experimental resources freely available to the academic community worldwide. Accordingly, these resources have now been used in numerous investigations of a multitude of cell processes. Quality control is extremely important for evaluating results generated by these resources. Because the annotation has been changed since 2005, which we originally used for the construction, we have updated these genomic resources accordingly. Here, we describe GenoBase (http://ecoli.naist.jp/GB/), which contains key information about comprehensive experimental resources of E. coli K-12, their quality control and several omics data sets generated using these resources.
Indexed as
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What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.