Evidence map›Paper›PMID 25398909›Full record

ArticleThe EMBO journal2015

Fission yeast Cactin restricts telomere transcription and elongation by controlling Rap1 levels.

Luca E Lorenzi, Amadou Bah, Harry Wischnewski, Vadim Shchepachev, Charlotte Soneson, Marco Santagostino, Claus M Azzalin

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
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  4. Article
  5. Review
  6. Subtelomeric Transcription and its Regulation.Journal of molecular biology · 2020
    Review
  7. Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Luca E LorenziInstitute of Biochemistry (IBC) Eidgenössische Technische Hochschule Zürich (ETHZ), Zürich, Switzerland.
Amadou BahInstitute of Biochemistry (IBC) Eidgenössische Technische Hochschule Zürich (ETHZ), Zürich, Switzerland.
Harry WischnewskiInstitute of Biochemistry (IBC) Eidgenössische Technische Hochschule Zürich (ETHZ), Zürich, Switzerland.
Vadim ShchepachevInstitute of Biochemistry (IBC) Eidgenössische Technische Hochschule Zürich (ETHZ), Zürich, Switzerland.
Charlotte SonesonBioinformatics Core Facility, SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.
Marco SantagostinoDipartimento di Biologia e Biotecnologie "L. Spallanzani", Università degli Studi di Pavia, Pavia, Italy.
Claus M AzzalinInstitute of Biochemistry (IBC) Eidgenössische Technische Hochschule Zürich (ETHZ), Zürich, Switzerland claus.azzalin@bc.biol.ethz.ch.
ETH Zurich · CHSIB Swiss Institute of Bioinformatics · CHUniversity of Pavia · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The telomeric transcriptome comprises multiple long non-coding RNAs generated by transcription of linear chromosome ends. In a screening performed in Schizosaccharomyces pombe, we identified factors modulating the cellular levels of the telomeric transcriptome. Among these factors, Cay1 is the fission yeast member of the conserved family of Cactins, uncharacterized proteins crucial for cell growth and survival. In cay1∆ mutants, the cellular levels of the telomeric factor Rap1 are drastically diminished due to defects in rap1+ pre-mRNA splicing and Rap1 protein stability. cay1∆ cells accumulate histone H3 acetylated at lysine 9 at telomeres, which become transcriptionally desilenced, are over-elongated by telomerase and cause chromosomal aberrations in the cold. Overexpressing Rap1 in cay1+ deleted cells significantly reverts all telomeric defects. Additionally, cay1∆ mutants accumulate unprocessed Tf2 retrotransposon RNA through Rap1-independent mechanisms. Thus, Cay1 plays crucial roles in cells by ultimately harmonizing expression of transcripts originating from seemingly unrelated genomic loci.

Indexed as

Chromosome AberrationsChromosomes, FungalGene DeletionNuclear ProteinsProtein StabilityRetroelementsRNA, FungalRNA, MessengerRNA SplicingSchizosaccharomycesSchizosaccharomyces pombe ProteinsShelterin ComplexTelomereTelomere-Binding ProteinsTranscription, GeneticNuclear ProteinsRap1 protein, S pombeRetroelementsRNA, FungalRNA, MessengerSchizosaccharomyces pombe ProteinsShelterin ComplexTelomere-Binding ProteinsCactinfission yeastheterochromatintelomeresTERRA

Identifiers

PMID25398909
PMCPMC4291484
OpenAlexW1981360784

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.