Evidence map›Paper›PMID 25398140›Full record

ArticlePloS one2014

Direct detection and differentiation of pathogenic Leptospira species using a multi-gene targeted real time PCR approach.

Ana Sofia Ferreira, Pedro Costa, Teresa Rocha, Ana Amaro, Maria Luísa Vieira, Ahmed Ahmed, Gertrude Thompson, Rudy A Hartskeerl, João Inácio

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Postflood Leptospirosis Outbreak Response Due toOpen forum infectious diseases · 2026
    Article
  3. Diagnostic Performance of Two Commercial qPCR Kits forTropical medicine and infectious disease · 2026
    Article
  4. Dynamics of Leptospirosis Transmission Within Urban Norway Rat (Transboundary and emerging diseases · 2025
    Article
  5. Article
  6. Article
  7. Potentially zoonotic pathogens and parasites in opportunistically sourced urban brown rats (Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Case Report: Locally Acquired Leptospirosis in a Minnesota Boy and His Dog.The American journal of tropical medicine and hygiene · 2024
    Article
  12. Genotyping ofFrontiers in microbiology · 2024
    Article
  13. Detection and Identification of PathogenicTransboundary and emerging diseases · 2024
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Molecular and Serological Identification of PathogenicTransboundary and emerging diseases · 2023
    Article
  19. First Molecular Detection of PathogensTropical medicine and infectious disease · 2022
    Article
  20. Comparison of TwoVeterinary sciences · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Ana Sofia FerreiraInstituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV, I.P.), Unidade Estratégica de Investigação e Serviços em Produção e Saúde Animal, Lisboa, Portugal; Instituto de Ciências Biomédicas de Abel Salazar, Universidade do Porto, Porto, Portugal.
Pedro CostaInstituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV, I.P.), Unidade Estratégica de Investigação e Serviços em Produção e Saúde Animal, Lisboa, Portugal; Unidade de Microbiologia Médica, Instituto de Higiene e Medicina Tropical, Universidade Nova de Lisboa, Lisboa, Portugal.
Teresa RochaInstituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV, I.P.), Unidade Estratégica de Investigação e Serviços em Produção e Saúde Animal, Lisboa, Portugal.
Ana AmaroInstituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV, I.P.), Unidade Estratégica de Investigação e Serviços em Produção e Saúde Animal, Lisboa, Portugal.
Maria Luísa VieiraUnidade de Microbiologia Médica, Instituto de Higiene e Medicina Tropical, Universidade Nova de Lisboa, Lisboa, Portugal.
Ahmed AhmedWHO/FAO/OIE and National Collaborating Centre for Reference and Research on Leptospirosis, KIT Biomedical Research, Amsterdam, The Netherlands.
Gertrude ThompsonInstituto de Ciências Biomédicas de Abel Salazar, Universidade do Porto, Porto, Portugal; Research Center in Biodiversity and Genetic Resources (CIBIO-ICETA), Universidade do Porto, Porto, Portugal.
Rudy A HartskeerlWHO/FAO/OIE and National Collaborating Centre for Reference and Research on Leptospirosis, KIT Biomedical Research, Amsterdam, The Netherlands.
João InácioInstituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV, I.P.), Unidade Estratégica de Investigação e Serviços em Produção e Saúde Animal, Lisboa, Portugal; School of Pharmacy and Biomolecular Sciences, University of Brighton, Brighton, United Kingdom.
Instituto Nacional de Investigação Agrária e Veterinária · PTRoyal Tropical Institute · NLUniversidade Nova de Lisboa · PTUniversidade do Porto · PTUniversity of Brighton · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Leptospirosis is a growing public and veterinary health concern caused by pathogenic species of Leptospira. Rapid and reliable laboratory tests for the direct detection of leptospiral infections in animals are in high demand not only to improve diagnosis but also for understanding the epidemiology of the disease. In this work we describe a novel and simple TaqMan-based multi-gene targeted real-time PCR approach able to detect and differentiate Leptospira interrogans, L. kirschneri, L. borgpeteresenii and L. noguchii, which constitute the veterinary most relevant pathogenic species of Leptospira. The method uses sets of species-specific probes, and respective flanking primers, designed from ompL1 and secY gene sequences. To monitor the presence of inhibitors, a duplex amplification assay targeting both the mammal β-actin and the leptospiral lipL32 genes was implemented. The analytical sensitivity of all primer and probe sets was estimated to be <10 genome equivalents (GE) in the reaction mixture. Application of the amplification reactions on genomic DNA from a variety of pathogenic and non-pathogenic Leptospira strains and other non-related bacteria revealed a 100% analytical specificity. Additionally, pathogenic leptospires were successfully detected in five out of 29 tissue samples from animals (Mus spp., Rattus spp., Dolichotis patagonum and Sus domesticus). Two samples were infected with L. borgpetersenii, two with L. interrogans and one with L. kirschneri. The possibility to detect and identify these pathogenic agents to the species level in domestic and wildlife animals reinforces the diagnostic information and will enhance our understanding of the epidemiology of leptopirosis.

Indexed as

Genes, BacterialAnimalsDNA PrimersDNA ProbesLeptospiraMiceRatsReal-Time Polymerase Chain ReactionSensitivity and SpecificitySpecies SpecificityDNA PrimersDNA Probes

Identifiers

PMID25398140
PMCPMC4232388
OpenAlexW2161896756

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.