Evidence map›Paper›PMID 25395621›Full record

ArticleThe Journal of biological chemistry2015

A switch between one- and two-electron chemistry of the human flavoprotein iodotyrosine deiodinase is controlled by substrate.

Jimin Hu, Watchalee Chuenchor, Steven E Rokita

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Biochemistry · 2024
    Article
  5. Misregulation of bromotyrosine compromises fertility in maleProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Review
  7. Article
  8. Article
  9. 1IUCrData · 2023
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Cryo-EM: A new dawn in thyroid biology.Molecular and cellular endocrinology · 2021
    Review
  16. Evolutionary aspects of the Viridiplantae nitroreductases.Journal, genetic engineering & biotechnology · 2020
    Article
  17. Article
  18. Review
  19. Review
  20. Redox control of iodotyrosine deiodinase.Protein science : a publication of the Protein Society · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jimin HuFrom the Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742 and.
Watchalee ChuenchorFrom the Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742 and.
Steven E RokitaFrom the Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742 and Department of Chemistry, The Johns Hopkins University, Baltimore, Maryland 21218 rokita@jhu.edu.
University of Maryland, College Park · US

Funding

Reductive Dehalogenation in Mammals by Iodotyrosine DeiodinaseR01DK084186 · NIDDK · UNIV OF MARYLAND, COLLEGE PARK · PI ROKITA, STEVEN E · 2009 to 2012
$1.3M
NIDDK NIH HHS R01 DK084186
6 · The paper itself

Abstract

Reductive dehalogenation is not typical of aerobic organisms but plays a significant role in iodide homeostasis and thyroid activity. The flavoprotein iodotyrosine deiodinase (IYD) is responsible for iodide salvage by reductive deiodination of the iodotyrosine derivatives formed as byproducts of thyroid hormone biosynthesis. Heterologous expression of the human enzyme lacking its N-terminal membrane anchor has allowed for physical and biochemical studies to identify the role of substrate in controlling the active site geometry and flavin chemistry. Crystal structures of human IYD and its complex with 3-iodo-l-tyrosine illustrate the ability of the substrate to provide multiple interactions with the isoalloxazine system of FMN that are usually provided by protein side chains. Ligand binding acts to template the active site geometry and significantly stabilize the one-electron-reduced semiquinone form of FMN. The neutral form of this semiquinone is observed during reductive titration of IYD in the presence of the substrate analog 3-fluoro-l-tyrosine. In the absence of an active site ligand, only the oxidized and two-electron-reduced forms of FMN are detected. The pH dependence of IYD binding and turnover also supports the importance of direct coordination between substrate and FMN for productive catalysis.

Indexed as

ElectronsBiocatalysisCatalytic DomainCrystallography, X-RayElectron TransportEscherichia coliFlavin MononucleotideFlavinsGene ExpressionHumansHydrogen-Ion ConcentrationIodide PeroxidaseIodidesModels, MolecularMonoiodotyrosineOxidation-Reduction3-fluorotyrosineFlavin MononucleotideFlavinsIodide PeroxidaseIodidesisoalloxazineMonoiodotyrosineRecombinant ProteinsTyrosineDehalogenaseEnzyme CatalysisEnzyme StructureFlavin Mononucleotide (FMN)FlavoproteinIodotyrosineOxidation-Reduction (Redox)Thyroid

Identifiers

PMID25395621
PMCPMC4281760
OpenAlexW2040577763

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.