Evidence map›Paper›PMID 25395406›Full record

ArticleGlycobiology2015

Affinities of human histo-blood group antigens for norovirus capsid protein complexes.

Ling Han, Elena N Kitova, Ming Tan, Xi Jiang, Benjamin Pluvinage, Alisdair B Boraston, John S Klassen

Open access · bronzeAbstract read
In one paragraph

Article in Glycobiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 24 citations in OpenAlex.

  1. Norovirus-glycan interactions - how strong are they really?Biochemical Society transactions · 2022
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Current tools for norovirus drug discovery.Expert opinion on drug discovery · 2016
    Review
  9. Antibody-based affinity cryo-EM grid.Methods (San Diego, Calif.) · 2016
    Article
  10. Anti-norovirus therapeutics: a patent review (2010-2015).Expert opinion on therapeutic patents · 2016
    Review
  11. Review
  12. Probing allosteric mechanisms using native mass spectrometry.Current opinion in structural biology · 2015
    Review
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Ling HanAlberta Glycomics Centre, Department of Chemistry, University of Alberta, Edmonton, AB, Canada T6G 2G2.
Elena N KitovaAlberta Glycomics Centre, Department of Chemistry, University of Alberta, Edmonton, AB, Canada T6G 2G2.
Ming TanDivision of Infectious Diseases, Cincinnati Children's Hospital Medical Center Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA.
Xi JiangDivision of Infectious Diseases, Cincinnati Children's Hospital Medical Center Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA.
Benjamin PluvinageDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC, Canada V8W 3P6.
Alisdair B BorastonDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC, Canada V8W 3P6.
John S KlassenAlberta Glycomics Centre, Department of Chemistry, University of Alberta, Edmonton, AB, Canada T6G 2G2 john.klassen@ualberta.ca.
University of Alberta · CAUniversity of Victoria · CAAlberta Glycomics Centre · CACincinnati Children's Hospital Medical Center · USUniversity of Cincinnati Medical Center · US

Funding

Novel vaccine against NorovirusR01AI089634 · NIAID · CINCINNATI CHILDRENS HOSP MED CTR · PI JIANG, XI · 2010 to 2014
$4.7M
Norovirus P Particle, A Multifunctional Platform For Vaccine DevelopmentR21AI092434 · NIAID · CINCINNATI CHILDRENS HOSP MED CTR · PI TAN, MING · 2011 to 2012
$421k
NIAID NIH HHS R01 AI089634NIAID NIH HHS R21 AI092434
6 · The paper itself

Abstract

The binding profiles of many human noroviruses (huNoVs) for human histo-blood group antigens have been characterized. However, quantitative-binding data for these important virus-host interactions are lacking. Here, we report on the intrinsic (per binding site) affinities of HBGA oligosaccharides for the huNoV VA387 virus-like particles (VLPs) and the associated subviral P particles measured using electrospray ionization mass spectrometry. The affinities of 13 HBGA oligosaccharides, containing A, B and H epitopes, with variable sizes (disaccharide to tetrasaccharide) and different precursor chain types (types 1, 2, 3, 5 and 6), were measured for the P particle, while the affinities of the A and B trisaccharides and A and B type 6 tetrasaccharides for the VLP were determined. The intrinsic affinities of the HBGA oligosaccharides for the P particle range from 500 to 2300 M(-1), while those of the A and B trisaccharides and the A and B type 6 tetrasaccharides for the VLP range from 1000 to 4000 M(-1). Comparison of these binding data with those measured previously for the corresponding P dimer reveals that the HBGA oligosaccharides tested exhibit similar intrinsic affinities for the P dimer and P particle. The intrinsic affinities for the VLP are consistently higher than those measured for the P particle, but within a factor of three. While the cause of the subtle differences in HBGA oligosaccharide affinities for the P dimer and P particle and those for the VLP remains unknown, the present data support the use of P dimers or P particles as surrogates to the VLP for huNoV-receptor-binding studies.

Indexed as

Blood Group AntigensCapsid ProteinsHumansNorovirusOligosaccharidesProtein BindingVirionBlood Group AntigensCapsid ProteinsOligosaccharidesaffinitiesantigenelectrospray ionization mass spectrometrynorovirus

Identifiers

PMID25395406
PMCPMC4351396
OpenAlexW2320457711

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.